RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 MPP4Q96JB8 637 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 TRNT1Q96Q11 434 aaKnown RBP7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 NELL2Q99435 816 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 SEMA6CQ9H3T2 930 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 SRMSQ9H3Y6 488 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 OSGEPL1Q9H4B0 414 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 LTB4R2Q9NPC1 389 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 POLE3Q9NRF9 147 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 ENOPH1Q9UHY7 261 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 PAIP2BQ9ULR5 123 aaKnown RBP7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 POFUT2Q9Y2G5 429 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 SH3GLB1Q9Y371 365 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 ATG4BQ9Y4P1 393 aa7.57□□□□□ -1.2
ARFGEF1-204ENST00000518290 NUMA1Q14980 2115 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 URADA6NGE7 173 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 EMC8O43402 210 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CTSVO60911 334 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 EPPINO95925 133 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 HOXB3P14651 431 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 NTSP30990 170 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 SSR2P43308 183 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 RGS1Q08116 209 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 SUZ12Q15022 739 aaKnown RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRTGQ2VWP7 1150 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PROX2Q3B8N5 592 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZNF628Q5EBL2 1059 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 TMEM201Q5SNT2 666 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 TTC33Q6PID6 262 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 KIAA1324Q6UXG2 1013 aaKnown RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 MRGPREQ86SM8 312 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZNF554Q86TJ5 538 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CAMKVQ8NCB2 501 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CCL4L1Q8NHW4 92 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 ADAMTS18Q8TE60 1221 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 GANCQ8TET4 914 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 DNASE2BQ8WZ79 361 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAL2Q969L2 176 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 MUL1Q969V5 352 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 TOE1Q96GM8 510 aaKnown RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 BARD1Q99728 777 aaKnown RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 REEP1Q9H902 201 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 SMURF2Q9HAU4 748 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 EXD2Q9NVH0 621 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 BAG5Q9UL15 447 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 LIPT1Q9Y234 373 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAGED1Q9Y5V3 778 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 C5orf42Q9H799 3197 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRAMEF33A0A0G2JMD5 474 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PDZK1P1A8MUH7 402 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CYR61O00622 381 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 P2RX6O15547 441 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRAMEF10O60809 474 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 GBAP04062 536 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 AK4P27144 223 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAT2AP31153 395 aaKnown RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CHI3L1P36222 383 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CRATP43155 626 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 IST1P53990 364 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 MANFP55145 182 aaKnown RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 DUSP2Q05923 314 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRRT3Q5FWE3 981 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CEACAM20Q6UY09 585 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 LINC00299Q6ZSB3 139 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 ABHD13Q7L211 337 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CCDC71Q8IV32 467 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 DNAJC22Q8N4W6 341 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 APH1BQ8WW43 257 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 CYGBQ8WWM9 190 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 TSACCQ96A04 125 aaPredicted RBP7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZFYVE21Q9BQ24 234 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 C17orf62Q9BQA9 187 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 LRRC61Q9BV99 259 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 PINK1Q9BXM7 581 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 ERVMER34-1Q9H9K5 563 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 FTSJ1Q9UET6 329 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 EPHA6Q9UF33 1036 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 DAPP1Q9UN19 280 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 AK5Q9Y6K8 562 aa7.56□□□□□ -1.2
ARFGEF1-204ENST00000518290 A0A1W2PRQ8 180 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 RTCAO00442 366 aaKnown RBP7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 FFAR1O14842 300 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 SEMA7AO75326 666 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 PGM3O95394 542 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 MT-ND1P03886 318 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 GGT2P36268 569 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 LSSP48449 732 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 CCT3P49368 545 aaKnown RBP7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 ARHGDIAP52565 204 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 LIM2P55344 173 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 ESRRGP62508 458 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 SLC35A2P78381 396 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 TFF2Q03403 129 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 CD47Q08722 323 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 CDK5R2Q13319 367 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 DGCR6Q14129 220 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 SPIDRQ14159 915 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAD2L1BPQ15013 274 aaPredicted RBP7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 FIGLAQ6QHK4 219 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 Q6ZS52 159 aa7.55□□□□□ -1.2
ARFGEF1-204ENST00000518290 CLEC4FQ8N1N0 589 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms