RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 LIMK2P53671 638 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 TMEM44Q2T9K0 475 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 CDC20BQ86Y33 519 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 CCDC71Q8IV32 467 aaPredicted RBP5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 FGFRL1Q8N441 504 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 CHDHQ8NE62 594 aaPredicted RBP5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 FBXO25Q8TCJ0 367 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 RAB39BQ96DA2 213 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 ZNF560Q96MR9 790 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 NARFQ9UHQ1 456 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 MRPL11Q9Y3B7 192 aaKnown RBP5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 GON4LQ3T8J9 2241 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 DHX29Q7Z478 1369 aaKnown RBP5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 KIF7Q2M1P5 1343 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TRBV2A0A0J9YWF9 115 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TEX48A0A1B0GUV7 120 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TRIM64A6NGJ6 449 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TRIM64BA6NI03 449 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TLR4O00206 839 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 RENP00797 406 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 VDRP11473 427 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 CNN1P51911 297 aaKnown RBP5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 CCZ1BP86790 482 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 CCZ1P86791 482 aaPredicted RBP5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 GALK2Q01415 458 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 GFPT1Q06210 699 aaPredicted RBP5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 CBX3Q13185 183 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 EMC2Q15006 297 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 VWA2Q5GFL6 755 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 ZNF506Q5JVG8 444 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 NKAIN2Q5VXU1 208 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 LIPJQ5W064 366 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 CDC42EP5Q6NZY7 148 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 RTL3Q8N8U3 475 aaKnown RBP5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 OR4Q3Q8NH05 313 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 OR4F5Q8NH21 305 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 CAPNS2Q96L46 248 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 SLC25A19Q9HC21 320 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 EIF3KQ9UBQ5 218 aaKnown RBP5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TRMT6Q9UJA5 497 aaKnown RBP5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 TEX264Q9Y6I9 313 aa5.03□□□□□ -1.6
SNORA48.9-201ENST00000516419 HCFC1P51610 2035 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 CYSRT1A8MQ03 144 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 SRRM5B3KS81 715 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 SH3BGRLO75368 114 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 CXCL14O95715 111 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 HPP00738 406 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ABHD2P08910 425 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 CCDC159P0C7I6 412 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ACADSBP45954 432 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 EXOSC7Q15024 291 aaKnown RBP5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 PCK2Q16822 640 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 GPAT3Q53EU6 434 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 WDR25Q64LD2 544 aaPredicted RBP5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 REP15Q6BDI9 236 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 HIST2H2AA3Q6FI13 130 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ETFRF1Q6IPR1 90 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 RHBDD2Q6NTF9 364 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ARMCX5Q6P1M9 558 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 P2RY8Q86VZ1 359 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 PEX5LQ8IYB4 626 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 RDH11Q8TC12 318 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 TEX13AQ9BXU3 409 aaPredicted RBP5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ABCG4Q9H172 646 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ERVK-18Q9QC07 812 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 TRIM10Q9UDY6 481 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ATG4BQ9Y4P1 393 aa5.02□□□□□ -1.61
SNORA48.9-201ENST00000516419 ERI2A8K979 691 aaKnown RBP5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 HSF2BPO75031 334 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 APRTP07741 180 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 TNFRSF4P43489 277 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 NT5C2P49902 561 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 TKTL1P51854 596 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 GSTO1P78417 241 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 AP1B1Q10567 949 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 PPP1R8Q12972 351 aaKnown RBP5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 PPP2R5CQ13362 524 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 PRAMEF7Q5VXH5 474 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 REG3GQ6UW15 175 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 DLEU7Q6UYE1 221 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 GPR142Q7Z601 462 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 LINC00518Q8N0U6 118 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 DTD2Q96FN9 168 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 COG3Q96JB2 828 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 C1orf147Q96MC9 270 aaPredicted RBP5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 Q9HAA7 133 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 RPS10P5Q9NQ39 176 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 KNSTRNQ9Y448 316 aa5.01□□□□□ -1.61
SNORA48.9-201ENST00000516419 MACROD2A1Z1Q3 448 aa5□□□□□ -1.61
SNORA48.9-201ENST00000516419 FOXI3A8MTJ6 420 aaPredicted RBP5□□□□□ -1.61
SNORA48.9-201ENST00000516419 NME2P1O60361 137 aa5□□□□□ -1.61
SNORA48.9-201ENST00000516419 REC8O95072 547 aa5□□□□□ -1.61
SNORA48.9-201ENST00000516419 MELTFP08582 738 aa5□□□□□ -1.61
SNORA48.9-201ENST00000516419 FCGR3AP08637 254 aa5□□□□□ -1.61
SNORA48.9-201ENST00000516419 HIST1H2AGP0C0S8 130 aaPredicted RBP5□□□□□ -1.61
SNORA48.9-201ENST00000516419 CALML3P27482 149 aa5□□□□□ -1.61
SNORA48.9-201ENST00000516419 PPP2R1BP30154 601 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms