RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 BAIAP2L1Q9UHR4 511 aa11.11□□□□□ -0.63
SNF8-215ENST00000515572 TEKT2Q9UIF3 430 aa11.11□□□□□ -0.63
SNF8-215ENST00000515572 EXO1Q9UQ84 846 aaKnown RBP11.11□□□□□ -0.63
SNF8-215ENST00000515572 ZNF195O14628 629 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 ATXN7O15265 892 aaPredicted RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 EDF1O60869 148 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 DDAH2O95865 285 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 ITGAMP11215 1152 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 G6PDP11413 515 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 EPHA3P29320 983 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 MPIP34949 423 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 MDH1P40925 334 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 GPR143P51810 404 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 C21orf58P58505 322 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 PTGR1Q14914 329 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 CEBPEQ15744 281 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 EPGNQ6UW88 154 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 ACAD11Q709F0 780 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 MAVSQ7Z434 540 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 GALNT12Q8IXK2 581 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 LGI4Q8N135 537 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 SLC5A8Q8N695 610 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 NATD1Q8N6N6 113 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 APCDD1LQ8NCL9 501 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 OR1N1Q8NGS0 311 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 OR8K3Q8NH51 312 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 CEP70Q8NHQ1 597 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 SLC2A12Q8TD20 617 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 BRIX1Q8TDN6 353 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 ACTRT2Q8TDY3 377 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 STON2Q8WXE9 905 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 TM9SF4Q92544 642 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 PPWD1Q96BP3 646 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 PPCDCQ96CD2 204 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 ABHD17AQ96GS6 310 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 LMF1Q96S06 567 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 PRPF18Q99633 342 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 SMAD5Q99717 465 aaKnown RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 NUDT9Q9BW91 350 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 OR8D2Q9GZM6 311 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 WDR55Q9H6Y2 383 aaPredicted RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
SNF8-215ENST00000515572 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNF8-215ENST00000515572 ATP6V1HQ9UI12 483 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 ZNF451Q9Y4E5 1061 aa11.1□□□□□ -0.63
SNF8-215ENST00000515572 GOLGA8QA0A0J9YX86 632 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 MYOCOSA0A1B0GUC4 107 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 A0A1W2PS29 197 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 GOLGA8OA6NCC3 632 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 MYO1GB0I1T2 1018 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 GOLGA8NF8WBI6 632 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 CDK2AP1O14519 115 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 DIAPH2O60879 1101 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ZFAND5O76080 213 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 SLITRK5O94991 958 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 LRATO95237 230 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 CELA2AP08217 269 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 NT5EP21589 574 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 NTSP30990 170 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 CLDN8P56748 225 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 MAP4K2Q12851 820 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 MFAP5Q13361 173 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ZNF267Q14586 743 aaPredicted RBP11.09□□□□□ -0.63
SNF8-215ENST00000515572 PRICKLE4Q2TBC4 344 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 SLC9B1Q4ZJI4 515 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 NXNQ6DKJ4 435 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ISLR2Q6UXK2 745 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ARMC10Q8N2F6 343 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 VWA5B2Q8N398 1253 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 EXD3Q8N9H8 876 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 CLHC1Q8NHS4 586 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ZFP28Q8NHY6 868 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 PSMF1Q92530 271 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 GFM2Q969S9 779 aaKnown RBP11.09□□□□□ -0.63
SNF8-215ENST00000515572 NCLNQ969V3 563 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ERP27Q96DN0 273 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 BBS4Q96RK4 519 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 CNPPD1Q9BV87 410 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 DEFB126Q9BYW3 111 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 EPS8L2Q9H6S3 715 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 CXorf21Q9HAI6 301 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 ATAD3AQ9NVI7 634 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
SNF8-215ENST00000515572 TNRC6AQ8NDV7 1962 aaKnown RBP11.08□□□□□ -0.64
SNF8-215ENST00000515572 CACNA1GO43497 2377 aa11.08□□□□□ -0.64
SNF8-215ENST00000515572 TRBV11-1A0A0K0K1C0 115 aa11.08□□□□□ -0.64
SNF8-215ENST00000515572 GABRR3A8MPY1 467 aa11.08□□□□□ -0.64
SNF8-215ENST00000515572 SCAMP2O15127 329 aaKnown RBP11.08□□□□□ -0.64
SNF8-215ENST00000515572 POLR3GO15318 223 aaPredicted RBP11.08□□□□□ -0.64
SNF8-215ENST00000515572 PDPK1O15530 556 aa11.08□□□□□ -0.64
SNF8-215ENST00000515572 AKAP10O43572 662 aa11.08□□□□□ -0.64
SNF8-215ENST00000515572 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms