RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DNAJB8Q8NHS0 232 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 GOT1L1Q8NHS2 421 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ZFP28Q8NHY6 868 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 RP9Q8TA86 221 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 SUN3Q8TAQ9 357 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC45A3Q96JT2 553 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 CCDC115Q96NT0 180 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 AMDHD1Q96NU7 426 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 IP6K3Q96PC2 410 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ALOXE3Q9BYJ1 711 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 RBCK1Q9BYM8 510 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 SOX17Q9H6I2 414 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ADAP2Q9NPF8 381 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 SH3BP4Q9P0V3 963 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 C19orf25Q9UFG5 118 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 PPIEQ9UNP9 301 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ENTPD4Q9Y227 616 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 MAN2B2Q9Y2E5 1009 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 PTRH2Q9Y3E5 179 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ZZEF1O43149 2961 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 WASHC1A8K0Z3 465 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 PLOD2O00469 737 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 ERAL1O75616 437 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 CDC123O75794 336 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 CAPN3P20807 821 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 F8A1P23610 371 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 NME5P56597 212 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 MAP4K2Q12851 820 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 KRT72Q14CN4 511 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 TLR1Q15399 786 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 PGS1Q32NB8 556 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 DPP10Q8N608 796 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 FITM2Q8N6M3 262 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 ADAMTS17Q8TE56 1095 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 METTL21AQ8WXB1 218 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 OR5P2Q8WZ92 322 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 EXOSC8Q96B26 276 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 CTHRC1Q96CG8 243 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 CMTM5Q96DZ9 223 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 SPDL1Q96EA4 605 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 RNF31Q96EP0 1072 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 RBM18Q96H35 190 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 VPS50Q96JG6 964 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 OR52E6Q96RD3 313 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 BBS4Q96RK4 519 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 RMND5AQ9H871 391 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 GPN2Q9H9Y4 310 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 NEUROD4Q9HD90 331 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 SLAMF7Q9NQ25 335 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 NTMQ9P121 344 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 C5AR2Q9P296 337 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 GMEB1Q9Y692 573 aa11.21□□□□□ -0.61
PDLIM5-220ENST00000514830 APC2O95996 2303 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 A0A087WV62 115 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 A0A1W2PRB8 838 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 CCDC154A6NI56 674 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TLX3O43711 291 aaPredicted RBP11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 PLOD3O60568 738 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 CREG1O75629 220 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 NPPAP01160 153 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 LIFP15018 202 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TRPC1P48995 793 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 DGKQP52824 942 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 DUSP2Q05923 314 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 GABPB1Q06547 395 aaPredicted RBP11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 MGAT2Q10469 447 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 STX5Q13190 355 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TGIF1Q15583 401 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 PRICKLE4Q2TBC4 344 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF628Q5EBL2 1059 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 MFSD4BQ5TF39 518 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 OR4F3Q6IEY1 312 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 ANKRD26P1Q6NSI1 321 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TMEM64Q6YI46 380 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TRPM8Q7Z2W7 1104 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 CPEB2Q7Z5Q1 589 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 RAB43Q86YS6 212 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 OR4N5Q8IXE1 308 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 OR14A16Q8NHC5 309 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 NUDT8Q8WV74 236 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TSLPQ969D9 159 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 CIDECQ96AQ7 238 aaPredicted RBP11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 DGAT2Q96PD7 388 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF700Q9H0M5 742 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 GLIPR2Q9H4G4 154 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 CXorf21Q9HAI6 301 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 SERHLQ9NQF3 203 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 TAS2R9Q9NYW1 312 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 ARMCX1Q9P291 453 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF639Q9UID6 485 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 LEF1Q9UJU2 399 aaPredicted RBP11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 NDUFAF1Q9Y375 327 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 HS3ST3B1Q9Y662 390 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 FREM2Q5SZK8 3169 aa11.2□□□□□ -0.62
PDLIM5-220ENST00000514830 URB1O60287 2271 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms