RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RRM2P31350 389 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 FEN1P39748 380 aaKnown RBP14.09□□□□□ -0.15
VCAN-211ENST00000513984 DAPP51397 102 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 NR1H2P55055 460 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 RUNX2Q13950 521 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 GPR19Q15760 415 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 RPS26P11Q5JNZ5 115 aaPredicted RBP14.09□□□□□ -0.15
VCAN-211ENST00000513984 SLC36A4Q6YBV0 504 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 ZNF438Q7Z4V0 828 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 SATL1Q86VE3 508 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 SAMD14Q8IZD0 417 aaPredicted RBP14.09□□□□□ -0.15
VCAN-211ENST00000513984 LMX1AQ8TE12 382 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 APOBEC4Q8WW27 367 aaKnown RBP14.09□□□□□ -0.15
VCAN-211ENST00000513984 HSPA12BQ96MM6 686 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 RUBCNLQ9H714 662 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 LYRM4Q9HD34 91 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 MS4A12Q9NXJ0 267 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 TUBA8Q9NY65 449 aaPredicted RBP14.09□□□□□ -0.15
VCAN-211ENST00000513984 NDUFA13Q9P0J0 144 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 PDP1Q9P0J1 537 aaPredicted RBP14.09□□□□□ -0.15
VCAN-211ENST00000513984 LYVE1Q9Y5Y7 322 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 PCDH15Q96QU1 1955 aa14.09□□□□□ -0.15
VCAN-211ENST00000513984 PRAMEF27A3QJZ7 478 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 TMEM247A6NEH6 219 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 LILRA5A6NI73 299 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 EMC8O43402 210 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 DNAJB5O75953 348 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 MFN2O95140 757 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 RECKO95980 971 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 OR12D1P0DN82 309 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 ALPPL2P10696 532 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 TYRP1P17643 537 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 CD247P20963 164 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 MATN1P21941 496 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 ANXA11P50995 505 aaKnown RBP14.08□□□□□ -0.15
VCAN-211ENST00000513984 NXPH1P58417 271 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 LAPTM4AQ15012 233 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 GPR153Q6NV75 609 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 FAHD1Q6P587 224 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 TMEM107Q6UX40 140 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 SZRD1Q7Z422 152 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 C17orf82Q86X59 251 aaPredicted RBP14.08□□□□□ -0.15
VCAN-211ENST00000513984 C8orf59Q8N0T1 100 aaPredicted RBP14.08□□□□□ -0.15
VCAN-211ENST00000513984 ARL14Q8N4G2 192 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 SMYD1Q8NB12 490 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 PIK3C3Q8NEB9 887 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 MIR1-1HGQ9H1L0 117 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 MRPS2Q9Y399 296 aaKnown RBP14.08□□□□□ -0.15
VCAN-211ENST00000513984 SLC22A7Q9Y694 548 aa14.08□□□□□ -0.15
VCAN-211ENST00000513984 LOC100130705A0A1B0GUX0 176 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 JRKO75564 520 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 UBXN7O94888 489 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 HMGN2P05204 90 aaKnown RBP14.08□□□□□ -0.16
VCAN-211ENST00000513984 ST6GAL1P15907 406 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 TLX1P31314 330 aaPredicted RBP14.08□□□□□ -0.16
VCAN-211ENST00000513984 XCR1P46094 333 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 OR1E2P47887 323 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 PRR5P85299 388 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 IL18R1Q13478 541 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 DUSP7Q16829 419 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 KLHL35Q6PF15 583 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 THAP5Q7Z6K1 395 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 SLC44A2Q8IWA5 706 aaPredicted RBP14.08□□□□□ -0.16
VCAN-211ENST00000513984 SDR16C5Q8N3Y7 309 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 CSNK1A1LQ8N752 337 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 C19orf47Q8N9M1 422 aaKnown RBP14.08□□□□□ -0.16
VCAN-211ENST00000513984 OR5D16Q8NGK9 328 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 OR9A2Q8NGT5 310 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 ELP4Q96EB1 424 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 CSF3RQ99062 836 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 GRIP2Q9C0E4 1043 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
VCAN-211ENST00000513984 DOLKQ9UPQ8 538 aa14.08□□□□□ -0.16
VCAN-211ENST00000513984 K7ESF4 209 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 SLC28A2O43868 658 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 MITFO75030 526 aaPredicted RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 BMP10O95393 424 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 EIF2S1P05198 315 aaKnown RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 BCKDHBP21953 392 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 PPP2R1BP30154 601 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 PTGER1P34995 402 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 MC3RP41968 323 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 CAPZBP47756 277 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 HNRNPKP61978 463 aaKnown RBP eCLIP14.07□□□□□ -0.16
VCAN-211ENST00000513984 KCNC4Q03721 635 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 LASP1Q14847 261 aaKnown RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 SYPL1Q16563 259 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 NADK2Q4G0N4 442 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 ZNF605Q86T29 641 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 UBALD2Q8IYN6 164 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 LGI4Q8N135 537 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 LRRC25Q8N386 305 aaPredicted RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 OR4C15Q8NGM1 316 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 RASSF5Q8WWW0 418 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 MAGED4Q96JG8 741 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 ZNF607Q96SK3 696 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 TREX2Q9BQ50 279 aaPredicted RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 C3orf14Q9HBI5 128 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 BCL2L10Q9HD36 194 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms