RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 LINC00303Q3SY05 128 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 B3GNTL1Q67FW5 361 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 FAM111BQ6SJ93 734 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 EPGNQ6UW88 154 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 MED25Q71SY5 747 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 NDUFAF7Q7L592 441 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 CLEC1AQ8NC01 280 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 SIMC1Q8NDZ2 872 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 FDCSPQ8NFU4 85 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 OR7A2PQ8NGA2 310 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 OR4K14Q8NGD5 310 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 OR9A2Q8NGT5 310 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 BRIX1Q8TDN6 353 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 SNRNP27Q8WVK2 155 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 TANKQ92844 425 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 NCLNQ969V3 563 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 THOC3Q96J01 351 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 MAELQ96JY0 434 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 IMMP1LQ96LU5 166 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 FER1L6-AS2Q96M78 137 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 CATSPER2Q96P56 530 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 BRINP2Q9C0B6 783 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 OR8D2Q9GZM6 311 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 CCDC134Q9H6E4 229 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 REEP4Q9H6H4 257 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 ANKRA2Q9H9E1 313 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 SLAMF7Q9NQ25 335 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 AIG1Q9NVV5 245 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 GPR83Q9NYM4 423 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 NOP53Q9NZM5 478 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF223Q9UK11 482 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 ERVK-19Q9WJR5 959 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 ENTPD4Q9Y227 616 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 TMED5Q9Y3A6 229 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 BSNQ9UPA5 3926 aa9.15□□□□□ -0.95
TOPBP1-209ENST00000513818 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.95
TOPBP1-209ENST00000513818 A0A0G2JND7 137 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TRBV11-1A0A0K0K1C0 115 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 BLACEA4D250 179 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 PRKNO60260 465 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 MAN1A2O60476 641 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 VPS4BO75351 444 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 DDAH2O95865 285 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 PDGFAP04085 211 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 CYC1P08574 325 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 COX7A2P14406 83 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 DRD2P14416 443 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SSTR4P31391 388 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 HPCAL1P37235 193 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SEC24CP53992 1094 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 GNGT1P63211 74 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 MRPS35P82673 323 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SERTAD2Q14140 314 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF267Q14586 743 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ELAVL1Q15717 326 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 COLEC12Q5KU26 742 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 IKBIPQ70UQ0 350 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ST13P4Q8IZP2 240 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 LRRC25Q8N386 305 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 GALNT16Q8N428 558 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TMEM102Q8N9M5 508 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 NFAM1Q8NET5 270 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SUN3Q8TAQ9 357 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SLC2A12Q8TD20 617 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 THAP3Q8WTV1 239 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 PTPMT1Q8WUK0 201 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 APOBEC4Q8WW27 367 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TTC9Q92623 222 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 KAT2AQ92830 837 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 PPCDCQ96CD2 204 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 METTL2AQ96IZ6 378 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF681Q96N22 645 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 IP6K3Q96PC2 410 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 BBS4Q96RK4 519 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TUBB6Q9BUF5 446 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 NUDT9Q9BW91 350 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TMEM120AQ9BXJ8 343 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 FAM107BQ9H098 131 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 LIN28AQ9H9Z2 209 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 KCNK13Q9HB14 408 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 TCF7L2Q9NQB0 619 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SLC35C2Q9NQQ7 365 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ASIC5Q9NY37 505 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 SH3BP4Q9P0V3 963 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 PTGFRNQ9P2B2 879 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 RALYQ9UKM9 306 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 CLCA3PQ9Y6N3 262 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF780BQ9Y6R6 833 aa9.14□□□□□ -0.95
TOPBP1-209ENST00000513818 DOCK10Q96BY6 2186 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 GABRR3A8MPY1 467 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 A8MUI8 341 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 ANKRD28O15084 1053 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 PDPK1O15530 556 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 F10P00742 488 aa9.13□□□□□ -0.95
TOPBP1-209ENST00000513818 CLPSP04118 112 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms