RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 SENP1Q9P0U3 644 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 LRFN1Q9P244 771 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 HEY2Q9UBP5 337 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ZNF639Q9UID6 485 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 MID2Q9UJV3 735 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ICE1Q9Y2F5 2266 aa9□□□□□ -0.97
RNF4-221ENST00000513643 CCDC151A5D8V7 595 aa9□□□□□ -0.97
RNF4-221ENST00000513643 ANKUB1A6NFN9 424 aa9□□□□□ -0.97
RNF4-221ENST00000513643 FCHO1O14526 889 aa9□□□□□ -0.97
RNF4-221ENST00000513643 NPHS1O60500 1241 aa9□□□□□ -0.97
RNF4-221ENST00000513643 GUCY1B2O75343 617 aa9□□□□□ -0.97
RNF4-221ENST00000513643 SLC25A12O75746 678 aa9□□□□□ -0.97
RNF4-221ENST00000513643 RASAL1O95294 804 aa9□□□□□ -0.97
RNF4-221ENST00000513643 ZIC2O95409 532 aaPredicted RBP9□□□□□ -0.97
RNF4-221ENST00000513643 ATP1B1P05026 303 aa9□□□□□ -0.97
RNF4-221ENST00000513643 UROSP10746 265 aa9□□□□□ -0.97
RNF4-221ENST00000513643 CPMP14384 443 aa9□□□□□ -0.97
RNF4-221ENST00000513643 DRD2P14416 443 aa9□□□□□ -0.97
RNF4-221ENST00000513643 SERPINB3P29508 390 aa9□□□□□ -0.97
RNF4-221ENST00000513643 HMOX2P30519 316 aa9□□□□□ -0.97
RNF4-221ENST00000513643 ARL1P40616 181 aaPredicted RBP9□□□□□ -0.97
RNF4-221ENST00000513643 GSTM5P46439 218 aa9□□□□□ -0.97
RNF4-221ENST00000513643 ST13P50502 369 aaKnown RBP9□□□□□ -0.97
RNF4-221ENST00000513643 XKP51811 444 aa9□□□□□ -0.97
RNF4-221ENST00000513643 PLIN5Q00G26 463 aa9□□□□□ -0.97
RNF4-221ENST00000513643 HMGCS1Q01581 520 aa9□□□□□ -0.97
RNF4-221ENST00000513643 DUSP2Q05923 314 aa9□□□□□ -0.97
RNF4-221ENST00000513643 IFFO1Q0D2I5 559 aa9□□□□□ -0.97
RNF4-221ENST00000513643 MAP4K2Q12851 820 aa9□□□□□ -0.97
RNF4-221ENST00000513643 MPP2Q14168 576 aa9□□□□□ -0.97
RNF4-221ENST00000513643 ZNF791Q3KP31 576 aaPredicted RBP9□□□□□ -0.97
RNF4-221ENST00000513643 SPIN4Q56A73 249 aa9□□□□□ -0.97
RNF4-221ENST00000513643 RNFT1Q5M7Z0 435 aa9□□□□□ -0.97
RNF4-221ENST00000513643 BEND6Q5SZJ8 279 aaPredicted RBP9□□□□□ -0.97
RNF4-221ENST00000513643 CES4AQ5XG92 561 aa9□□□□□ -0.97
RNF4-221ENST00000513643 MDGA2Q7Z553 956 aa9□□□□□ -0.97
RNF4-221ENST00000513643 CHERPQ8IWX8 916 aaKnown RBP9□□□□□ -0.97
RNF4-221ENST00000513643 MMP21Q8N119 569 aa9□□□□□ -0.97
RNF4-221ENST00000513643 FAM26EQ8N5C1 309 aa9□□□□□ -0.97
RNF4-221ENST00000513643 HORMAD2Q8N7B1 307 aa9□□□□□ -0.97
RNF4-221ENST00000513643 OR4K14Q8NGD5 310 aa9□□□□□ -0.97
RNF4-221ENST00000513643 OR5L2Q8NGL0 311 aa9□□□□□ -0.97
RNF4-221ENST00000513643 RIT1Q92963 219 aa9□□□□□ -0.97
RNF4-221ENST00000513643 PGM2Q96G03 612 aa9□□□□□ -0.97
RNF4-221ENST00000513643 FCRL1Q96LA6 429 aa9□□□□□ -0.97
RNF4-221ENST00000513643 FRMD6Q96NE9 622 aa9□□□□□ -0.97
RNF4-221ENST00000513643 PSMG3-AS1Q96PY0 264 aa9□□□□□ -0.97
RNF4-221ENST00000513643 FAM111AQ96PZ2 611 aa9□□□□□ -0.97
RNF4-221ENST00000513643 OR8D2Q9GZM6 311 aa9□□□□□ -0.97
RNF4-221ENST00000513643 WDR41Q9HAD4 459 aa9□□□□□ -0.97
RNF4-221ENST00000513643 OLAHQ9NV23 265 aa9□□□□□ -0.97
RNF4-221ENST00000513643 EXO1Q9UQ84 846 aaKnown RBP9□□□□□ -0.97
RNF4-221ENST00000513643 WBP11Q9Y2W2 641 aaKnown RBP9□□□□□ -0.97
RNF4-221ENST00000513643 ACTL7BQ9Y614 415 aa9□□□□□ -0.97
RNF4-221ENST00000513643 CENPEQ02224 2701 aa9□□□□□ -0.97
RNF4-221ENST00000513643 UNC79Q9P2D8 2635 aa9□□□□□ -0.97
RNF4-221ENST00000513643 OR6C76A6NM76 312 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SEMA7AO75326 666 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SPAG7O75391 227 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 OR2J2O76002 312 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 RSL1D1O76021 490 aaKnown RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 OR6B1O95007 311 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 CRYABP02511 175 aaKnown RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 BPGMP07738 259 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 STSP08842 583 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 CT62P0C5K7 136 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 COX7A2P14406 83 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 CD46P15529 392 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 PORP16435 677 aaPredicted RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 TNNI3P19429 210 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 TIA1P31483 386 aaKnown RBP eCLIP8.99□□□□□ -0.975e-7■■■■□ 23.6
RNF4-221ENST00000513643 SERPINB5P36952 375 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SSR4P51571 173 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 DUSP8Q13202 625 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 EBPQ15125 230 aaKnown RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 PRSS53Q2L4Q9 553 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 PRICKLE4Q2TBC4 344 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 EIF2S3LQ2VIR3 472 aaKnown RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 ZNF750Q32MQ0 723 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 ARL13AQ5H913 290 aaPredicted RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 CFAP157Q5JU67 520 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 KANK2Q63ZY3 851 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SCIMPQ6UWF3 145 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 FAM180AQ6UWF9 173 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 LRIG3Q6UXM1 1119 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 GALNTL5Q7Z4T8 443 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 HOMEZQ8IX15 550 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SLC15A4Q8N697 577 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 ZFP62Q8NB50 900 aaPredicted RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 TMEM178AQ8NBL3 297 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 C17orf47Q8NEP4 570 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 C16orf52Q8NHV5 167 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SUN3Q8TAQ9 357 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 C16orf78Q8WTQ4 265 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 THAP3Q8WTV1 239 aaPredicted RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 ADIPOR1Q96A54 375 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 CNRIP1Q96F85 164 aaPredicted RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 ART5Q96L15 291 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 ZIM3Q96PE6 472 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 SMC6Q96SB8 1091 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms