RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 AZIN1O14977 448 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 ERAL1O75616 437 aaKnown RBP12.58□□□□□ -0.4
SNF8-206ENST00000509989 ZFAND5O76080 213 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 NADKO95544 446 aaPredicted RBP12.58□□□□□ -0.4
SNF8-206ENST00000509989 LINC00032P0C843 101 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 HSD3B1P14060 373 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 S1PR1P21453 382 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 HSD3B2P26439 372 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 TLX1P31314 330 aaPredicted RBP12.58□□□□□ -0.4
SNF8-206ENST00000509989 TIA1P31483 386 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNF8-206ENST00000509989 RFC3P40938 356 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 SOX3P41225 446 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 XKP51811 444 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 TDGF1P3P51864 188 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 KIAA0040Q15053 153 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 C10orf62Q5T681 223 aaPredicted RBP12.58□□□□□ -0.4
SNF8-206ENST00000509989 KANK2Q63ZY3 851 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 LYPD8Q6UX82 237 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 TMEM64Q6YI46 380 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 TRIM46Q7Z4K8 759 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 ST13P4Q8IZP2 240 aaPredicted RBP12.58□□□□□ -0.4
SNF8-206ENST00000509989 ADCY4Q8NFM4 1077 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 FAR1Q8WVX9 515 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 DAZLQ92904 295 aaKnown RBP12.58□□□□□ -0.4
SNF8-206ENST00000509989 EGLN2Q96KS0 407 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 C3orf30Q96M34 536 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 RASL10BQ96S79 203 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 TEKT2Q9UIF3 430 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 ZDHHC2Q9UIJ5 367 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 MCM8Q9UJA3 840 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 DNAJC15Q9Y5T4 150 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 ZNF407Q9C0G0 2248 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 NUP214P35658 2090 aaPredicted RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 BLACEA4D250 179 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 G3V3Y1 287 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 OR10H2O60403 315 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 SEMA7AO75326 666 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 JUNP05412 331 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 SP1P08047 785 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 DHRS4L1P0CG22 281 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 SLC35E2P0CK97 266 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 UROSP10746 265 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 CPMP14384 443 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 PIK3R1P27986 724 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 TRHRP34981 398 aaPredicted RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 SERPINB4P48594 390 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 HLCSP50747 726 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 SLC37A1P57057 533 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 AP2B1P63010 937 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 PLIN5Q00G26 463 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 ASPHQ12797 758 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 EXOSC7Q15024 291 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 SPDYAQ5MJ70 313 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 DESI1Q6ICB0 168 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 RPUSD3Q6P087 351 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 CLEC18BQ6UXF7 455 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 IL20RBQ6UXL0 311 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 HSDL2Q6YN16 418 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 PAGE2Q7Z2X7 111 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 LGI4Q8N135 537 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 CPSF7Q8N684 471 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 GBP7Q8N8V2 638 aaPredicted RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 CLEC18CQ8NCF0 446 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 GALNT11Q8NCW6 608 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 OR4K14Q8NGD5 310 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 CDC26Q8NHZ8 85 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNF8-206ENST00000509989 RIT1Q92963 219 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 EXOSC8Q96B26 276 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 RBM18Q96H35 190 aaKnown RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 FBXL20Q96IG2 436 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 TRIM45Q9H8W5 580 aaPredicted RBP12.57□□□□□ -0.4
SNF8-206ENST00000509989 WDR41Q9HAD4 459 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 CXorf21Q9HAI6 301 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 MYOTQ9UBF9 498 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 STK38LQ9Y2H1 464 aa12.57□□□□□ -0.4
SNF8-206ENST00000509989 MYO7BQ6PIF6 2116 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 DIDO1Q9BTC0 2240 aaKnown RBP12.56□□□□□ -0.4
SNF8-206ENST00000509989 GNG14A0A1W2PPG7 69 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 C1orf226A1L170 272 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 PIP5K1BO14986 540 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 NPHS1O60500 1241 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 VPS4BO75351 444 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 CRCPO75575 148 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 SLC25A12O75746 678 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 LRATO95237 230 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 ANXA4P09525 319 aaPredicted RBP12.56□□□□□ -0.4
SNF8-206ENST00000509989 CYB561P49447 251 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 WDR4P57081 412 aaKnown RBP12.56□□□□□ -0.4
SNF8-206ENST00000509989 KCNK10P57789 538 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 GPR85P60893 370 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 MRPS35P82673 323 aaKnown RBP12.56□□□□□ -0.4
SNF8-206ENST00000509989 ACSM2AQ08AH3 577 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 MAPKAPK3Q16644 382 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms