RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 TRIM45Q9H8W5 580 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 LIN28AQ9H9Z2 209 aaKnown RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 EML4Q9HC35 981 aaKnown RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 TNFRSF12AQ9NP84 129 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 HPF1Q9NWY4 346 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 PSME2Q9UL46 239 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 A0A1W2PS29 197 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 HRKO00198 91 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 AZIN1O14977 448 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 NME2P1O60361 137 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 NPHS1O60500 1241 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 ERAL1O75616 437 aaKnown RBP15.73■□□□□ 0.11
CLDND1-219ENST00000508659 CBX6O95503 412 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 SP1P08047 785 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 IL3P08700 152 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 CPMP14384 443 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 NT5EP21589 574 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 NME2P22392 152 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 SERPINB3P29508 390 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 GSTM5P46439 218 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 XKP51811 444 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 RAE1P78406 368 aaKnown RBP15.73■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF763Q0D2J5 394 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 HEPACAMQ14CZ8 416 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 MAPKAPK3Q16644 382 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 SLC25A25Q6KCM7 469 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 GALNT18Q6P9A2 607 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 LRIG3Q6UXM1 1119 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 C16orf47Q6ZP98 133 aaPredicted RBP15.73■□□□□ 0.11
CLDND1-219ENST00000508659 ZCCHC23Q6ZST2 131 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 SLC29A4Q7RTT9 530 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 TRIM46Q7Z4K8 759 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 GALNTL5Q7Z4T8 443 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 C9orf40Q8IXQ3 194 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 FAM26EQ8N5C1 309 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 CDC26Q8NHZ8 85 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 NUBPLQ8TB37 319 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 DOK4Q8TEW6 326 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 TM4SF18Q96CE8 201 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 RASL10BQ96S79 203 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 SSU72Q9NP77 194 aaKnown RBP15.73■□□□□ 0.11
CLDND1-219ENST00000508659 PFDN4Q9NQP4 134 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 UTS2RQ9UKP6 389 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 ERVK-11Q9UQG0 969 aa15.73■□□□□ 0.11
CLDND1-219ENST00000508659 MYO18BQ8IUG5 2567 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 TMEM200CA6NKL6 621 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 CTIFO43310 598 aaKnown RBP15.72■□□□□ 0.11
CLDND1-219ENST00000508659 CHRNGP07510 517 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 ANXA4P09525 319 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-219ENST00000508659 NEFHP12036 1026 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 PORP16435 677 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-219ENST00000508659 SERPINB5P36952 375 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 SOX3P41225 446 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 FHL5Q5TD97 284 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 KANK2Q63ZY3 851 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 HOMEZQ8IX15 550 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 DNAJB8Q8NHS0 232 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 PPP1R14CQ8TAE6 165 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 PRR7Q8TB68 274 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 SLC22A8Q8TCC7 542 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 CXorf21Q9HAI6 301 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 TIMMDC1Q9NPL8 285 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 ENTPD4Q9Y227 616 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 DLGAP4Q9Y2H0 992 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 KLF13Q9Y2Y9 288 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-219ENST00000508659 POLR3HQ9Y535 204 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF780BQ9Y6R6 833 aa15.72■□□□□ 0.11
CLDND1-219ENST00000508659 OR6C76A6NM76 312 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 RGS14O43566 566 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 OR6B1O95007 311 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 ATP1B1P05026 303 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 BPGMP07738 259 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF24P17028 368 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 CSNK2A2P19784 350 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 FEN1P39748 380 aaKnown RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 ETV4P43268 484 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 EBPQ15125 230 aaKnown RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 EIF2S3LQ2VIR3 472 aaKnown RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF750Q32MQ0 723 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 ARL13AQ5H913 290 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 SH2D4BQ5SQS7 431 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 LRRC25Q8N386 305 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 VWA5B2Q8N398 1253 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 AGR3Q8TD06 166 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 C16orf78Q8WTQ4 265 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 ZBTB9Q96C00 473 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 C11orf24Q96F05 449 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 PGM2Q96G03 612 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 FRMD6Q96NE9 622 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 BRINP2Q9C0B6 783 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 WWTR1Q9GZV5 400 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 STMN4Q9H169 189 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-219ENST00000508659 GIMAP4Q9NUV9 329 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 SIRT5Q9NXA8 310 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 CES1P1Q9UKY3 287 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 PTGDR2Q9Y5Y4 395 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 NBASA2RRP1 2371 aa15.71■□□□□ 0.11
CLDND1-219ENST00000508659 SHANK1Q9Y566 2161 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms