RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 RELNP78509 3460 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 PRKNO60260 465 aaPredicted RBP18.44■□□□□ 0.54
SFXN1-209ENST00000508290 TRIM13O60858 407 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 PRKRAO75569 313 aaKnown RBP18.44■□□□□ 0.54
SFXN1-209ENST00000508290 STSP08842 583 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 UROSP10746 265 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 PORP16435 677 aaPredicted RBP18.44■□□□□ 0.54
SFXN1-209ENST00000508290 HEPACAMQ14CZ8 416 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 C4orf17Q53FE4 359 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 GFRALQ6UXV0 394 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 RTL4Q6ZR62 310 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 ZNF227Q86WZ6 799 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 SRRM1Q8IYB3 904 aaKnown RBP18.44■□□□□ 0.54
SFXN1-209ENST00000508290 FAM76AQ8TAV0 307 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 PPWD1Q96BP3 646 aaKnown RBP18.44■□□□□ 0.54
SFXN1-209ENST00000508290 HBEGFQ99075 208 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 CNPPD1Q9BV87 410 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 CXorf21Q9HAI6 301 aa18.44■□□□□ 0.54
SFXN1-209ENST00000508290 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
SFXN1-209ENST00000508290 MYOCOSA0A1B0GUC4 107 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 FOXO6A8MYZ6 492 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 PGRMC2O15173 223 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 PCDH7O60245 1069 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 ATP1B1P05026 303 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 CPMP14384 443 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 ZNF24P17028 368 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 CSNK2A2P19784 350 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-209ENST00000508290 XKP51811 444 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 ERVK-8P63133 956 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 IMPG1Q17R60 797 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 TCHHL1Q5QJ38 904 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-209ENST00000508290 RNF165Q6ZSG1 346 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 TRIM46Q7Z4K8 759 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-209ENST00000508290 OR7G1Q8NGA0 311 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 TM4SF18Q96CE8 201 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 GPR137Q96N19 417 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 HES7Q9BYE0 225 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 EHD3Q9NZN3 535 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 CES1P1Q9UKY3 287 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 ERVK-19Q9WJR5 959 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 CFL2Q9Y281 166 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 ZNF780BQ9Y6R6 833 aa18.43■□□□□ 0.54
SFXN1-209ENST00000508290 GNG14A0A1W2PPG7 69 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 WWP2O00308 870 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 UBFD1O14562 309 aaKnown RBP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 SEMA7AO75326 666 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 UNC5CO95185 931 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 TIA1P31483 386 aaKnown RBP eCLIP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 SERPINB5P36952 375 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 CASP6P55212 293 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 SLC37A1P57057 533 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 SRSF11Q05519 484 aaKnown RBP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 ZNF267Q14586 743 aaPredicted RBP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 ESPL1Q14674 2120 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 PCLAFQ15004 111 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 PIGGQ5H8A4 983 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 RGS9BPQ6ZS82 235 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 C9orf40Q8IXQ3 194 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 ZNF321PQ8N8H1 164 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 PSD4Q8NDX1 1056 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 C17orf47Q8NEP4 570 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 TP53INP1Q96A56 240 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 C11orf24Q96F05 449 aaPredicted RBP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 EML4Q9HC35 981 aaKnown RBP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 OSGIN2Q9Y236 505 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 TIMM22Q9Y584 194 aa18.42■□□□□ 0.54
SFXN1-209ENST00000508290 V9GYY5 206 aaPredicted RBP18.42■□□□□ 0.54
SFXN1-209ENST00000508290 USP9XQ93008 2570 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-209ENST00000508290 WIPF3A6NGB9 483 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 CAPN14A8MX76 684 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 PEX1O43933 1283 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 RSL1D1O76021 490 aaKnown RBP18.41■□□□□ 0.54
SFXN1-209ENST00000508290 CHEK2O96017 543 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 MST1P26927 711 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 SOX3P41225 446 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 HTR6P50406 440 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 PMP22Q01453 160 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 FUT7Q11130 342 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 SPDYAQ5MJ70 313 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 MTFR2Q6P444 385 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 C10orf107Q8IVU9 208 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 SULF2Q8IWU5 870 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 TAGAPQ8N103 731 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 ZFP62Q8NB50 900 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-209ENST00000508290 C16orf52Q8NHV5 167 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 KLHL29Q96CT2 875 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 ERP27Q96DN0 273 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 PSMG3-AS1Q96PY0 264 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 KCNA7Q96RP8 456 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 WWTR1Q9GZV5 400 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 GIMAP4Q9NUV9 329 aa18.41■□□□□ 0.54
SFXN1-209ENST00000508290 ERRFI1Q9UJM3 462 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-209ENST00000508290 NPIPB8E9PQR5 432 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 NPHS1O60500 1241 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 OR6B1O95007 311 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 NEFHP12036 1026 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 NT5EP21589 574 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 SERPINB3P29508 390 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms