RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 TRIM40Q6P9F5 258 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 PAQR3Q6TCH7 311 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 PLEKHM3Q6ZWE6 761 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 LUZP2Q86TE4 346 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 TMEM139Q8IV31 216 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 C9orf40Q8IXQ3 194 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 OR10G3Q8NGC4 313 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 C1orf54Q8WWF1 131 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 ANKRD7Q92527 254 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 MED12Q93074 2177 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 ABTB1Q969K4 478 aaPredicted RBP8.33□□□□□ -1.08
CAST-220ENST00000508117 SENP5Q96HI0 755 aaPredicted RBP8.33□□□□□ -1.08
CAST-220ENST00000508117 ART5Q96L15 291 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 MARK4Q96L34 752 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 JSRP1Q96MG2 331 aaPredicted RBP8.33□□□□□ -1.08
CAST-220ENST00000508117 TSNARE1Q96NA8 513 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 WFIKKN1Q96NZ8 548 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 LACRTQ9GZZ8 138 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 NT5DC2Q9H857 520 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 UBTD1Q9HAC8 227 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 LYRM4Q9HD34 91 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAST-220ENST00000508117 PACSIN3Q9UKS6 424 aa8.33□□□□□ -1.08
CAST-220ENST00000508117 EPN1Q9Y6I3 576 aaPredicted RBP8.33□□□□□ -1.08
CAST-220ENST00000508117 A0A0G2JN53 185 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TP53I11O14683 189 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 PHF1O43189 567 aaPredicted RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 DYRK3O43781 588 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 CD5LO43866 347 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TRAPPC6AO75865 159 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 IPO7O95373 1038 aaKnown RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 ACSL3O95573 720 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 MLNP12872 115 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 LOXP28300 417 aaPredicted RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 SLCO1A2P46721 670 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 STT3AP46977 705 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 IL2P60568 153 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TNK1Q13470 666 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 SNX1Q13596 522 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 ETFDHQ16134 617 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 SEL1L2Q5TEA6 688 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 ABHD17CQ6PCB6 329 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TMIGD1Q6UXZ0 262 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 MILR1Q7Z6M3 343 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TMPRSS11BQ86T26 416 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 THOC6Q86W42 341 aaKnown RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 LRRC8AQ8IWT6 810 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 FAM13CQ8NE31 585 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TMEM171Q8WVE6 324 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 SREK1Q8WXA9 508 aaKnown RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 UCN3Q969E3 161 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 ZNF669Q96BR6 464 aaPredicted RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 LINGO1Q96FE5 620 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 PIK3IP1Q96FE7 263 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 FBXL20Q96IG2 436 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 RUNDC3BQ96NL0 473 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 ANGPTL4Q9BY76 406 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 REXO4Q9GZR2 422 aaKnown RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 CXorf56Q9H5V9 222 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 C15orf41Q9Y2V0 281 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 REXO2Q9Y3B8 237 aaKnown RBP8.32□□□□□ -1.08
CAST-220ENST00000508117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
CAST-220ENST00000508117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.32□□□□□ -1.082e-6■■■■□ 24.4
CAST-220ENST00000508117 CUBNO60494 3623 aa8.32□□□□□ -1.08
CAST-220ENST00000508117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 TCRBV7S3A2A0A539 114 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 SDR42E2A6NKP2 422 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 CAPN14A8MX76 684 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 LDB3O75112 727 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 CDH16O75309 829 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 H2AFYO75367 372 aaKnown RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 TNFSF13O75888 250 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 TBX6O95947 436 aaPredicted RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 FTCDO95954 541 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 CRHP06850 196 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 F7P08709 466 aaPredicted RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 FAM157CP0CG43 387 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 C1GALT1C1LP0DN25 315 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 GNAZP19086 355 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 CERS1P27544 350 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 CD79BP40259 229 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 PLA2G16P53816 162 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 NAGLUP54802 743 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 TGM3Q08188 693 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 RPS6KA2Q15349 733 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 CHRFAM7AQ494W8 412 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 DCST1Q5T197 706 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 SBSNQ6UWP8 590 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 CAND1Q86VP6 1230 aaKnown RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 KRT78Q8N1N4 520 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 C2CD4AQ8NCU7 369 aaPredicted RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 SRFBP1Q8NEF9 429 aaKnown RBP8.31□□□□□ -1.08
CAST-220ENST00000508117 SPPL2AQ8TCT8 520 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 SLC44A1Q8WWI5 657 aa8.31□□□□□ -1.08
CAST-220ENST00000508117 DIO2Q92813 273 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms