RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 EIF2B2P49770 351 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 RAB28P51157 221 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 HYAL1Q12794 435 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 SAXO2Q658L1 398 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 NCCRP1Q6ZVX7 275 aaPredicted RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 PRSS48Q7RTY5 328 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 P3H2Q8IVL5 708 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 FRMD1Q8N878 549 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 AQP11Q8NBQ7 271 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 S100ZQ8WXG8 99 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 NEURL3Q96EH8 262 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 GABARAPL3Q9BY60 117 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 QRSL1Q9H0R6 528 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 GLIPR2Q9H4G4 154 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ZBTB20Q9HC78 741 aaPredicted RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 OBP2AQ9NY56 170 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ZNF226Q9NYT6 803 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 OSGIN1Q9UJX0 560 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ANGPT4Q9Y264 503 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 FAM32AQ9Y421 112 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 AQP9O43315 295 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 SOX14O95416 240 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 ADRA2AP08913 450 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 CXCR2P25025 360 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 SEC23BQ15437 767 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 C18orf63Q68DL7 685 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 DEF8Q6ZN54 512 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 WDR53Q7Z5U6 358 aaPredicted RBP13.73□□□□□ -0.21
DDX41-208ENST00000507955 OR4E2Q8NGC2 313 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 GEMIN6Q8WXD5 167 aaKnown RBP13.73□□□□□ -0.21
DDX41-208ENST00000507955 PDXPQ96GD0 296 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 COPS4Q9BT78 406 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 PRR14Q9BWN1 585 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 SPATA7Q9P0W8 599 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 TRPC4Q9UBN4 977 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 ACSL5Q9ULC5 683 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 ATG4BQ9Y4P1 393 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 M0R082 166 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 GPC1P35052 558 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 GGT2P36268 569 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 HYAL2Q12891 473 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 KIAA1161Q6NSJ0 714 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 MEX3DQ86XN8 651 aaKnown RBP13.73□□□□□ -0.21
DDX41-208ENST00000507955 CCDC116Q8IYX3 515 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 OR5P2Q8WZ92 322 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 COL21A1Q96P44 957 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 C1QTNF2Q9BXJ5 285 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 MRPS30Q9NP92 439 aaKnown RBP13.73□□□□□ -0.21
DDX41-208ENST00000507955 TSC22D4Q9Y3Q8 395 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 ENPP4Q9Y6X5 453 aa13.73□□□□□ -0.21
DDX41-208ENST00000507955 SEMA3DO95025 777 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 ADH1BP00325 375 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 IFNW1P05000 195 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 STSP08842 583 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 ADPRHP54922 357 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 RPS21P63220 83 aaKnown RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 SLAMF1Q13291 335 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 ENPP2Q13822 863 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 PTGES3Q15185 160 aaKnown RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 SOWAHCQ53LP3 525 aaPredicted RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 ZNF776Q68DI1 518 aaPredicted RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 PLEKHG7Q6ZR37 379 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 LINC00299Q6ZSB3 139 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 ARMC8Q8IUR7 673 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 DOK4Q8TEW6 326 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 GGHQ92820 318 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 TSACCQ96A04 125 aaPredicted RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 PSD2Q9BQI7 771 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 APOOQ9BUR5 198 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 DSN1Q9H410 356 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 NMNAT1Q9HAN9 279 aaPredicted RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 THSD1Q9NS62 852 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D29Q9UFV1 150 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 EFCAB9A8MZ26 197 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 SLC28A2O43868 658 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 MFN2O95140 757 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 CERS1P27544 350 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 GRK5P34947 590 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 NCBP2P52298 156 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX41-208ENST00000507955 PIN1Q13526 163 aaPredicted RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 SLC22A16Q86VW1 577 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 SVOPQ8N4V2 548 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 DNAJC5GQ8N7S2 189 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 KIAA1958Q8N8K9 716 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 IL17RCQ8NAC3 791 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 ITPKCQ96DU7 683 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 TREX2Q9BQ50 279 aaPredicted RBP13.72□□□□□ -0.21
DDX41-208ENST00000507955 OR51I1Q9H343 314 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 KCNE3Q9Y6H6 103 aa13.72□□□□□ -0.21
DDX41-208ENST00000507955 A0A0A6YYD5 115 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 A0A1W2PR48 441 aa13.71□□□□□ -0.21
DDX41-208ENST00000507955 M0R3H8 397 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms