RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 RBM4BQ9BQ04 359 aaKnown RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 JPH2Q9BR39 696 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 DCTPP1Q9H773 170 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 NT5DC2Q9H857 520 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 SLC25A19Q9HC21 320 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 CTSZQ9UBR2 303 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 HOOK1Q9UJC3 728 aaKnown RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 ENTPD4Q9Y227 616 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 KIAA1217Q5T5P2 1943 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 KRT87PA6NCN2 255 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 SH2D1BO14796 132 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ARPC1BO15143 372 aaKnown RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 DUSP11O75319 330 aaKnown RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 OR6B1O95007 311 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 MT-ATP6P00846 226 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 CGAP01215 116 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 IGHG1P01857 330 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 SERPINB2P05120 415 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 KRT5P13647 590 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ETS1P14921 441 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 GNSP15586 552 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 NUMBP49757 651 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNF131P52739 623 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 NLRP11P59045 1033 aaKnown RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 MS4A2Q01362 244 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 PAX8Q06710 450 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 RAPSNQ13702 412 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 EMC2Q15006 297 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 POM121L1PQ3SYA9 428 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 GLIPR1L2Q4G1C9 344 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 CCDC92Q53HC0 331 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 TOR1AIP1Q5JTV8 583 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 FAM182AQ5T1J6 154 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 STEAP1BQ6NZ63 245 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 RPAINQ86UA6 219 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZSCAN30Q86W11 494 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ELMOD2Q8IZ81 293 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 KDM8Q8N371 416 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 LRRC17Q8N6Y2 441 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNF781Q8N8C0 355 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 MRPL43Q8N983 215 aaKnown RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 COLGALT1Q8NBJ5 622 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 RELL2Q8NC24 303 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 CHDHQ8NE62 594 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 OR1K1Q8NGR3 316 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 SPATA3Q8NHX4 192 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 P3H4Q92791 437 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 PNPLA2Q96AD5 504 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 CAPNS2Q96L46 248 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNF597Q96LX8 424 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 CBWD1Q9BRT8 395 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 FTHL17Q9BXU8 183 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 NACA2Q9H009 215 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 SIRPDQ9H106 197 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 GTSE1Q9NYZ3 720 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 NINJ2Q9NZG7 142 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 SPASTQ9UBP0 616 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 RARRES3Q9UL19 164 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 MGAT4AQ9UM21 535 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 NUDCQ9Y266 331 aa3.32□□□□□ -1.88
HMGB1P28-201ENST00000507778 TCF20Q9UGU0 1960 aaKnown RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 NPC1L1Q9UHC9 1359 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 SALL1Q9NSC2 1324 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 BICDL2A1A5D9 508 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 SSX5O60225 188 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 PRPSAP2O60256 369 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 FRAT2O75474 233 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 GAS8-AS1O95177 125 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 MAPK3P27361 379 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 ATP4BP51164 291 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 NDST1P52848 882 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 ATXN3P54252 364 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 RPS4XP62701 263 aaKnown RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 IL1RL1Q01638 556 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 CD300CQ08708 224 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 KLF5Q13887 457 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 BTG3Q14201 252 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 SIX1Q15475 284 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 CLPPQ16740 277 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 HAGHQ16775 308 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 SHROOM1Q2M3G4 852 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNF343Q6P1L6 599 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 PAQR6Q6TCH4 344 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 CWC27Q6UX04 472 aaKnown RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 OLFM4Q6UX06 510 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 GPR142Q7Z601 462 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 YRDCQ86U90 279 aaKnown RBP3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 SLC22A16Q86VW1 577 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 PHC2Q8IXK0 858 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 ABHD12Q8N2K0 398 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 SAMD12Q8N8I0 201 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNRF1Q8ND25 227 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 OR4F5Q8NH21 305 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 FAM111AQ96PZ2 611 aa3.31□□□□□ -1.88
HMGB1P28-201ENST00000507778 ATG10Q9H0Y0 220 aa3.31□□□□□ -1.88
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