RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 A0A087WUV0 522 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ANKRD33BA6NCL7 494 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 FAM166BA8MTA8 275 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 FBXO45P0C2W1 286 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 GABRA1P14867 456 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 GMPRP36959 345 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 MAN2A2P49641 1150 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 NRG3P56975 720 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 HERVK_113P63132 956 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ERVK-8P63133 956 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF267Q14586 743 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 GXYLT1Q4G148 440 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 WLSQ5T9L3 541 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 C18orf63Q68DL7 685 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 TRILQ7L0X0 811 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 C9orf40Q8IXQ3 194 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 C17orf53Q8N3J3 647 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 FBXW8Q8N3Y1 598 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 TMEM251Q8N6I4 163 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF321PQ8N8H1 164 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ACBD4Q8NC06 268 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 C17orf47Q8NEP4 570 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 OR5M3Q8NGP4 307 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 MTBPQ96DY7 904 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 PAFAH2Q99487 392 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 SORBS1Q9BX66 1292 aaKnown RBP13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ERVK-6Q9BXR3 956 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ELOVL6Q9H5J4 265 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 SH2D2AQ9NP31 389 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ZFP64Q9NPA5 681 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 KCNJ16Q9NPI9 418 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 XPR1Q9UBH6 696 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 PSME2Q9UL46 239 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 SNX6Q9UNH7 406 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 ERVK-19Q9WJR5 959 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 RNF11Q9Y3C5 154 aa13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.32□□□□□ -0.28
HMGCS1-203ENST00000507004 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 A0A1W2PR48 441 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 GOLGA6L10A6NI86 522 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 NPIPA2E9PIF3 369 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 NPIPA3F8WFD2 350 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 TMPRSS11DO60235 418 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 EEDO75530 441 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 PDE9AO76083 593 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 SIX3O95343 332 aaPredicted RBP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 ACSL3O95573 720 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 AIFM1O95831 613 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 SNRPAP09012 282 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 ACVR2AP27037 513 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 PEX19P40855 299 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 SLC37A1P57057 533 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 KCNJ2P63252 427 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 FOXO1Q12778 655 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 SF3B4Q15427 424 aaKnown RBP eCLIP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 MILR1Q7Z6M3 343 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 GALNT12Q8IXK2 581 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 OR7G1Q8NGA0 311 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 OR4K14Q8NGD5 310 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 PPWD1Q96BP3 646 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 PHF21BQ96EK2 531 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 LURAP1Q96LR2 239 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 GAL3ST4Q96RP7 486 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 TREX2Q9BQ50 279 aaPredicted RBP13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 C1QTNF3Q9BXJ4 246 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 WWTR1Q9GZV5 400 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 BRF2Q9HAW0 419 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 ACKR4Q9NPB9 350 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 PCTPQ9UKL6 214 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 STK38LQ9Y2H1 464 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 ABCA12Q86UK0 2595 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF407Q9C0G0 2248 aa13.31□□□□□ -0.28
HMGCS1-203ENST00000507004 TRGV5A0A0B4J1U4 118 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 C1orf226A1L170 272 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 PINLYPA6NC86 204 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 OR7A17O14581 309 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 SNX4O95219 450 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 RPS17P08708 135 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 ABHD2P08910 425 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 CCL3P10147 92 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 HSD3B1P14060 373 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 TAC1P20366 129 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 HSD3B2P26439 372 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 MAGEA5P43359 124 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 DNASE1L1P49184 302 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 TRA2BP62995 288 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 FUT7Q11130 342 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 NTRK2Q16620 822 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 CCNYL2Q5T2Q4 361 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 TMEM198Q66K66 360 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms