RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NDOR1Q9UHB4 597 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 EIF3LQ9Y262 564 aaKnown RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 KCNMB2Q9Y691 235 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 TTC36A6NLP5 189 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 DNAJA2O60884 412 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 SKAP2O75563 359 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 JRKO75564 520 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 MAOAP21397 527 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 CPN2P22792 545 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 UFM1P61960 85 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 EEF1A2Q05639 463 aaKnown RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 TSTA3Q13630 321 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 LANCL3Q6ZV70 420 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 SPATA21Q7Z572 469 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 GPALPP1Q8IXQ4 340 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 KRTCAP2Q8N6L1 136 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 OR5P2Q8WZ92 322 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 GTF2H4Q92759 462 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 MOAP1Q96BY2 351 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 BARD1Q99728 777 aaKnown RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 PEX11AO75192 247 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 BCAS2O75934 225 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 C8orf89P0DMQ9 161 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 PORP16435 677 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 LCN1P31025 176 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 GYS2P54840 703 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 TMPRSS3P57727 454 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 TMEM198Q66K66 360 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 C9orf40Q8IXQ3 194 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 B3GNT7Q8NFL0 401 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 OR4K14Q8NGD5 310 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 MR1Q95460 341 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 EBPLQ9BY08 206 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 SERHL2Q9H4I8 314 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 NPHS2Q9NP85 383 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 FXYD1O00168 92 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 ASNA1O43681 348 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 SEC24CP53992 1094 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 CALHM3Q86XJ0 350 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 DND1Q8IYX4 353 aaKnown RBP7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 LRRC25Q8N386 305 aaPredicted RBP7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 FNDC5Q8NAU1 212 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 CHDHQ8NE62 594 aaPredicted RBP7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 PPP1R14CQ8TAE6 165 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 COL26A1Q96A83 441 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 TUBGCP3Q96CW5 907 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 CCT8L2Q96SF2 557 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 PAIP2Q9BPZ3 127 aaKnown RBP7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 SAP130Q9H0E3 1048 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 ADNPQ9H2P0 1102 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 TRPC4Q9UBN4 977 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 C3orf18Q9UK00 162 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 MRPS33Q9Y291 106 aaKnown RBP7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 ATMQ13315 3056 aa7.71□□□□□ -1.17
CDC42SE2-208ENST00000505065 NGFRP08138 427 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 LAMP1P11279 417 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 CAPN3P20807 821 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 HPCAL1P37235 193 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 GNGT1P63211 74 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 PIGGQ5H8A4 983 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ACAD11Q709F0 780 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 RAB43Q86YS6 212 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 DDIASQ8IXT1 998 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ELP4Q96EB1 424 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 NEURL3Q96EH8 262 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 COPS7BQ9H9Q2 264 aaPredicted RBP7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ATP6AP2A0A1C7CYW4 349 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF860A6NHJ4 632 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 E9PBE3 544 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 UBDO15205 165 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 KLHL41O60662 606 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 FZD7O75084 574 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ATP6AP2O75787 350 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 SERPINA7P05543 415 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 RPS4Y1P22090 263 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 EMP2P54851 167 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 RPS18P62269 152 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 RPS15P62841 145 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 VAC14Q08AM6 782 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 FAM47EQ6ZV65 393 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM132CQ8N3T6 1108 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM102Q8N9M5 508 aaPredicted RBP7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZCCHC14Q8WYQ9 949 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZBTB9Q96C00 473 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 SCMH1Q96GD3 660 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 ABCD2Q9UBJ2 740 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 A0A096LPI6 279 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 A0A1W2PP18 115 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 BBIP1A8MTZ0 92 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 NPIPB9F8W1W9 429 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 UPK1AO00322 258 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 SLC22A3O75751 556 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 GBAP04062 536 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 DRD5P21918 477 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 TRPC1P48995 793 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 GAS1P54826 345 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 OCA2Q04671 838 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 MYBPC3Q14896 1274 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 IMPG1Q17R60 797 aa7.71□□□□□ -1.18
CDC42SE2-208ENST00000505065 DCAF10Q5QP82 559 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms