RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RNF103-CHMP3A0A140T963 221 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 A0A1B0GX78 115 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 PRAMEF27A3QJZ7 478 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 OR2W5A6NFC9 320 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 LDB3O75112 727 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 CNOT3O75175 753 aaKnown RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 ERAL1O75616 437 aaKnown RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 RFPL3O75679 317 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 GPR75O95800 540 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 ATP1B1P05026 303 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 IFI6P09912 130 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 CT62P0C5K7 136 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 CCL4P13236 92 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 RNH1P13489 461 aaKnown RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 NCK1P16333 377 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 CSNK2A2P19784 350 aaPredicted RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 UQCRC2P22695 453 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 NTSP30990 170 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 MAN2A2P49641 1150 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 ARL4DP49703 201 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 ERFP50548 548 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 NCBP2P52298 156 aaKnown RBP eCLIP9.75□□□□□ -0.85
TPM3-217ENST00000504663 FUT5Q11128 374 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 ERV3-1Q14264 604 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 RGNQ15493 299 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.75□□□□□ -0.85
TPM3-217ENST00000504663 PHF19Q5T6S3 580 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 NIPAL1Q6NVV3 410 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 FAM111BQ6SJ93 734 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 GLRX5Q86SX6 157 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 MICU2Q8IYU8 434 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 VPS37AQ8NEZ2 397 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 BHLHE22Q8NFJ8 381 aaPredicted RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 OR7G2Q8NG99 324 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 SFXN5Q8TD22 340 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 ADAMTS18Q8TE60 1221 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 SLCO4A1Q96BD0 722 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 CTHRC1Q96CG8 243 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 MMABQ96EY8 250 aaPredicted RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 DUS3LQ96G46 650 aaKnown RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 PEX11GQ96HA9 241 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 REXO5Q96IC2 774 aaKnown RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 KCTD14Q9BQ13 255 aaPredicted RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 RSPO3Q9BXY4 272 aaPredicted RBP9.75□□□□□ -0.85
TPM3-217ENST00000504663 ANKRA2Q9H9E1 313 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 MAT2BQ9NZL9 334 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 ACTR3BQ9P1U1 418 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 NCDNQ9UBB6 729 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 EGFL7Q9UHF1 273 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 L3MBTL1Q9Y468 752 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 SNX13Q9Y5W8 968 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 MAU2Q9Y6X3 613 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 PCNX2A6NKB5 2137 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 GVINP1Q7Z2Y8 2422 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 MYOCOSA0A1B0GUC4 107 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 EFCAB7A8K855 629 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 AGRPO00253 132 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 PLOD2O00469 737 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 NME6O75414 186 aaPredicted RBP9.74□□□□□ -0.85
TPM3-217ENST00000504663 CIB2O75838 187 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 CLPSP04118 112 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 FHP07954 510 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ARAFP10398 606 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ETFAP13804 333 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ZNF28P17035 718 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 S1PR1P21453 382 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 PPP2R1BP30154 601 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 SOAT1P35610 550 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ETV5P41161 510 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 MC3RP41968 323 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 AVPR1BP47901 424 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 XKP51811 444 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 MANFP55145 182 aaKnown RBP9.74□□□□□ -0.85
TPM3-217ENST00000504663 FOXL2P58012 376 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 RPS26P62854 115 aaKnown RBP9.74□□□□□ -0.85
TPM3-217ENST00000504663 BTG2P78543 158 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 MC2RQ01718 297 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 RHAGQ02094 409 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ILKQ13418 452 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 FLOT2Q14254 428 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 NKG7Q16617 165 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 SWI5Q1ZZU3 235 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 PRICKLE4Q2TBC4 344 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 FAM214AQ32MH5 1076 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 AASDHQ4L235 1098 aaPredicted RBP9.74□□□□□ -0.85
TPM3-217ENST00000504663 STPG1Q5TH74 334 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 C1orf189Q5VU69 101 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 LCN10Q6JVE6 187 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 TMEM107Q6UX40 140 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 RNF130Q86XS8 419 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ZNF595Q8IYB9 648 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ADGRG5Q8IZF4 528 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 DEPDC4Q8N2C3 294 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 LRRC25Q8N386 305 aaPredicted RBP9.74□□□□□ -0.85
TPM3-217ENST00000504663 HORMAD2Q8N7B1 307 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ENDOVQ8N8Q3 282 aaKnown RBP9.74□□□□□ -0.85
TPM3-217ENST00000504663 OR2T12Q8NG77 320 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 OR4K14Q8NGD5 310 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 OR52E4Q8NGH9 312 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms