RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 IL1RL2Q9HB29 575 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 DEPPQ9NTK1 212 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 NMRK1Q9NWW6 199 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 CELSR1Q9NYQ6 3014 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 EXOC1LA0A1B0GW35 172 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 G3V3Y1 287 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 PGRMC2O15173 223 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 TMPRSS11DO60235 418 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 SEMA3DO95025 777 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 OTCP00480 354 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 GBAP04062 536 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 IGKV3-11P04433 115 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 NR2F6P10588 404 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 TAC1P20366 129 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 MAGEA12P43365 314 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 KIR3DL1P43629 444 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 KRTAP10-9P60411 292 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 UBAP2Q5T6F2 1119 aaKnown RBP11.05□□□□□ -0.64
MED28-203ENST00000503945 HLA-DQA1Q5Y7H0 255 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 RNF111Q6ZNA4 994 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 DGAT2L6Q6ZPD8 337 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 FGD2Q7Z6J4 655 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 DND1Q8IYX4 353 aaKnown RBP11.05□□□□□ -0.64
MED28-203ENST00000503945 TAGAPQ8N103 731 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 OR4K14Q8NGD5 310 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 DOK4Q8TEW6 326 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 ISL2Q96A47 359 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 SDCCAG3Q96C92 435 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 ZNF717Q9BY31 904 aaPredicted RBP11.05□□□□□ -0.64
MED28-203ENST00000503945 TTTY12Q9BZ98 90 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 TP63Q9H3D4 680 aaPredicted RBP11.05□□□□□ -0.64
MED28-203ENST00000503945 LDAHQ9H6V9 325 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 SEMA4BQ9NPR2 832 aaPredicted RBP11.05□□□□□ -0.64
MED28-203ENST00000503945 XPR1Q9UBH6 696 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 ADAM29Q9UKF5 820 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 PCTPQ9UKL6 214 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 PSME2Q9UL46 239 aa11.05□□□□□ -0.64
MED28-203ENST00000503945 C2orf92A0A1B0GVN3 265 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 PINLYPA6NC86 204 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 OR14I1A6ND48 311 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 OR6C76A6NM76 312 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 FAM166BA8MTA8 275 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 NPIPA2E9PIF3 369 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 NPIPA3F8WFD2 350 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 HRKO00198 91 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ADAM10O14672 748 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ZNF354AO60765 605 aaPredicted RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 PRKRAO75569 313 aaKnown RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 DEKP35659 375 aaKnown RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 XKP51811 444 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 CDH13P55290 713 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 HERVK_113P63132 956 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ERVK-8P63133 956 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 SPRED3Q2MJR0 410 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ZNF791Q3KP31 576 aaPredicted RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 OR52E8Q6IFG1 317 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 TIFABQ6ZNK6 161 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 NCCRP1Q6ZVX7 275 aaPredicted RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 CD163Q86VB7 1156 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 CNPY4Q8N129 248 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 OR4F6Q8NGB9 312 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 RND1Q92730 232 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 MTBPQ96DY7 904 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 NSUN5Q96P11 429 aaKnown RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 DMRTA2Q96SC8 542 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ERVK-6Q9BXR3 956 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 EXO5Q9H790 373 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ZDHHC11Q9H8X9 412 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ZBTB26Q9HCK0 441 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 CNIH4Q9P003 139 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ACAD8Q9UKU7 415 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 NFU1Q9UMS0 254 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 SNX6Q9UNH7 406 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 ERVK-19Q9WJR5 959 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 HRH3Q9Y5N1 445 aa11.04□□□□□ -0.64
MED28-203ENST00000503945 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
MED28-203ENST00000503945 CCDC168Q8NDH2 2452 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ATP6AP2A0A1C7CYW4 349 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 TP53I11O14683 189 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 SUSD5O60279 629 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ATP6AP2O75787 350 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 GLSO94925 669 aaPredicted RBP11.03□□□□□ -0.64
MED28-203ENST00000503945 AIFM1O95831 613 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 CCL3P10147 92 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ECHS1P30084 290 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 HSD17B3P37058 310 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 PIGAP37287 484 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 MAGEA5P43359 124 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 MAPK12P53778 367 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 SLC37A1P57057 533 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 KCNJ2P63252 427 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms