RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PCDHGA9Q9Y5G4 932 aaKnown RBP15.38■□□□□ 0.05
SCLT1-205ENST00000503401 TRBV11-1A0A0K0K1C0 115 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF195O14628 629 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 PORP16435 677 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-205ENST00000503401 GSTM5P46439 218 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 GPR143P51810 404 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF267Q14586 743 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-205ENST00000503401 TERF2Q15554 542 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 SLC9B1Q4ZJI4 515 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 AGAP7PQ5VUJ5 663 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 ARFGAP2Q8N6H7 521 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 ADCY4Q8NFM4 1077 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 THAP3Q8WTV1 239 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-205ENST00000503401 WBP1Q96G27 269 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF681Q96N22 645 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 AGAP4Q96P64 663 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 SMAD5Q99717 465 aaKnown RBP15.37■□□□□ 0.05
SCLT1-205ENST00000503401 TUBD1Q9UJT1 453 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 G3BP2Q9UN86 482 aaKnown RBP15.37■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF780BQ9Y6R6 833 aa15.37■□□□□ 0.05
SCLT1-205ENST00000503401 SYNDIG1LA6NDD5 238 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 TRPC5OSA6NMA1 111 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 TCP11X1B4DZS4 312 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 SLCO1B7G3V0H7 640 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 PRKNO60260 465 aaPredicted RBP15.36■□□□□ 0.05
SCLT1-205ENST00000503401 MAN1A2O60476 641 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 CT62P0C5K7 136 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 G6PDP11413 515 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 NT5EP21589 574 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 MAPK1P28482 360 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 DIO3P55073 304 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 ERVK-8P63133 956 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 GUCY1A3Q02108 690 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 EMX2Q04743 252 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 BIKQ13323 160 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 LTB4RQ15722 352 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 LACTB2Q53H82 288 aaPredicted RBP15.36■□□□□ 0.05
SCLT1-205ENST00000503401 TCTN3Q6NUS6 607 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 ASB18Q6ZVZ8 466 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 IKBIPQ70UQ0 350 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 LARP4Q71RC2 724 aaKnown RBP eCLIP15.36■□□□□ 0.059e-7■■■■■ 29.6
SCLT1-205ENST00000503401 CCDC116Q8IYX3 515 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 MORN4Q8NDC4 146 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF721Q8TF20 911 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 SLC39A7Q92504 469 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 VMP1Q96GC9 406 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 SENP5Q96HI0 755 aaPredicted RBP15.36■□□□□ 0.05
SCLT1-205ENST00000503401 NPAS2Q99743 824 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 SLC25A18Q9H1K4 315 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 SLC35C2Q9NQQ7 365 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 EHD3Q9NZN3 535 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 PPIEQ9UNP9 301 aaKnown RBP15.36■□□□□ 0.05
SCLT1-205ENST00000503401 ERVK-19Q9WJR5 959 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 EIF3LQ9Y262 564 aaKnown RBP15.36■□□□□ 0.05
SCLT1-205ENST00000503401 USH1CQ9Y6N9 552 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 CFAP46Q8IYW2 2715 aa15.36■□□□□ 0.05
SCLT1-205ENST00000503401 F10P00742 488 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 PRB1P04280 392 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 LBPP18428 481 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CSNK2A2P19784 350 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CD97P48960 835 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CLCN2P51788 898 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF385BQ569K4 471 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 COLEC12Q5KU26 742 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 JMJD6Q6NYC1 403 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 LRRC25Q8N386 305 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 KRTCAP2Q8N6L1 136 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 OR1N1Q8NGS0 311 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 THOC1Q96FV9 657 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 PELOQ9BRX2 385 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 REEP4Q9H6H4 257 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 LIN28AQ9H9Z2 209 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CXorf21Q9HAI6 301 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 NOP53Q9NZM5 478 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 ENTPD4Q9Y227 616 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 WBP11Q9Y2W2 641 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 DIAPH2O60879 1101 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 VPS4BO75351 444 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 ALPPP05187 535 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 ALDOCP09972 364 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 SSTR4P31391 388 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 SOX11P35716 441 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 ASMTP46597 345 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 AP2B1P63010 937 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 MAD2L1Q13257 205 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 SOWAHCQ53LP3 525 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CRB2Q5IJ48 1285 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 NXNQ6DKJ4 435 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 FAM111BQ6SJ93 734 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 ISLR2Q6UXK2 745 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 C16orf47Q6ZP98 133 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 RGS9BPQ6ZS82 235 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 PTRH1Q86Y79 214 aaKnown RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 GALNT12Q8IXK2 581 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 OR9A2Q8NGT5 310 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 SUN3Q8TAQ9 357 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CIDECQ96AQ7 238 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 FBXL20Q96IG2 436 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 OR52B2Q96RD2 323 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 BBS4Q96RK4 519 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms