RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PROK2Q9HC23 129 aa15□□□□□ -0.01
SCLT1-204ENST00000503215 LYARQ9NX58 379 aaKnown RBP15□□□□□ -0.01
SCLT1-204ENST00000503215 PSD3Q9NYI0 1048 aa15□□□□□ -0.01
SCLT1-204ENST00000503215 PDZD2O15018 2839 aa15□□□□□ -0.01
SCLT1-204ENST00000503215 ATP6AP2A0A1C7CYW4 349 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 STX16-NPEPL1H3BU86 382 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 STX16O14662 325 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 OR10H2O60403 315 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 ATP6AP2O75787 350 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 KLK1P06870 262 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 GCAP28676 217 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 SSTR4P31391 388 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 BUD31P41223 144 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-204ENST00000503215 SERPINB9P50453 376 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 ARFIP1P53367 373 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 SLC37A1P57057 533 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 PHEXP78562 749 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 FRG2Q64ET8 278 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 METTL2BQ6P1Q9 378 aaKnown RBP14.99□□□□□ -0.01
SCLT1-204ENST00000503215 ARHGAP11AQ6P4F7 1023 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 CCDC71Q8IV32 467 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-204ENST00000503215 GOLM1Q8NBJ4 401 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 OR4F6Q8NGB9 312 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 RIT1Q92963 219 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 FRG2BQ96QU4 278 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 GAL3ST4Q96RP7 486 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 SERPINI1Q99574 410 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 NTMT1Q9BV86 223 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 PNPLA3Q9NST1 481 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 SACM1LQ9NTJ5 587 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 POLQO75417 2590 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 NINQ8N4C6 2090 aa14.99□□□□□ -0.01
SCLT1-204ENST00000503215 IQANK1A0A1B0GTG1 560 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 P04436 131 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 RPS17P08708 135 aaKnown RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 CT62P0C5K7 136 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 RFPL3SP0C7P2 107 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 CTAGE8P0CG41 777 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 GABPB1Q06547 395 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SPRED3Q2MJR0 410 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 GXYLT1Q4G148 440 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 PRAMEF20Q5VT98 475 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 LETMD1Q6P1Q0 360 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 GK5Q6ZS86 529 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 TRILQ7L0X0 811 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 MILR1Q7Z6M3 343 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SLC22A16Q86VW1 577 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 NUDT13Q86X67 352 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 CTAGE4Q8IX94 777 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 OR10G3Q8NGC4 313 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 OR5M3Q8NGP4 307 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SPACA9Q96E40 222 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 UCK2Q9BZX2 261 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 WWTR1Q9GZV5 400 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 IL1RL2Q9HB29 575 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 ZNF225Q9UK10 706 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 NFU1Q9UMS0 254 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 IKBKGQ9Y6K9 419 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 CSMD2Q7Z408 3487 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 A8MT66 165 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SMIM24O75264 130 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 KRT38O76015 456 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SEMA3DO95025 777 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 IGHG3P01860 377 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SLC35E2P0CK97 266 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 COL6A2P12110 1019 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 NUP107P57740 925 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 KRTAP10-9P60411 292 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 PMPCAQ10713 525 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 BIKQ13323 160 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 EBPQ15125 230 aaKnown RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 TCHHL1Q5QJ38 904 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 NDUFAF5Q5TEU4 345 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SLC22A10Q63ZE4 541 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 TTC19Q6DKK2 380 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 RNF111Q6ZNA4 994 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 RGS9BPQ6ZS82 235 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 FAM109AQ8N4B1 249 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 MNS1Q8NEH6 495 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 ZNF483Q8TF39 744 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 CA5BP1Q8WTZ4 195 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SMC6Q96SB8 1091 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 HBEGFQ99075 208 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 MRPL57Q9BQC6 102 aaKnown RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 CXorf21Q9HAI6 301 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 ZNF180Q9UJW8 692 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 RNF6Q9Y252 685 aa14.98□□□□□ -0.01
SCLT1-204ENST00000503215 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.98□□□□□ -0.01
SCLT1-204ENST00000503215 A0A087WUV0 522 aaPredicted RBP14.97□□□□□ -0.01
SCLT1-204ENST00000503215 LRRC3CA6NJW4 275 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 ACOT7O00154 380 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 DYRK3O43781 588 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 PDYNP01213 254 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 FBXO45P0C2W1 286 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 ENDOUP21128 410 aaKnown RBP14.97□□□□□ -0.01
SCLT1-204ENST00000503215 PTGER4P35408 488 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 HYAL4Q2M3T9 481 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 TSNAXIP1Q2TAA8 658 aa14.97□□□□□ -0.01
SCLT1-204ENST00000503215 TEX35Q5T0J7 233 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms