RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TFAP2EQ6VUC0 442 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF517Q6ZMY9 492 aaPredicted RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 C16orf62Q7Z3J2 963 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 SPRED2Q7Z698 418 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 THOC6Q86W42 341 aaKnown RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 NKAIN4Q8IVV8 208 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ADHFE1Q8IWW8 467 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 DMRTC2Q8IXT2 367 aaPredicted RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF555Q8NEP9 628 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ASZ1Q8WWH4 475 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 SLC5A11Q8WWX8 675 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 NINJ1Q92982 152 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 IRF7Q92985 503 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 CMTM7Q96FZ5 175 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 TMEM68Q96MH6 324 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ZSWIM3Q96MP5 696 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 NODALQ96S42 347 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 NPAS1Q99742 590 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 RBM4BQ9BQ04 359 aaKnown RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 TCF25Q9BQ70 676 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 RBM4Q9BWF3 364 aaKnown RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 CPEB1Q9BZB8 566 aaKnown RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 MMP28Q9H239 520 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 RNF167Q9H6Y7 350 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 TM9SF3Q9HD45 589 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 GSN-AS1Q9NRJ2 163 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 TDP1Q9NUW8 608 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 EHD3Q9NZN3 535 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 CCDC59Q9P031 241 aaKnown RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 GULP1Q9UBP9 304 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 VPS29Q9UBQ0 182 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 C3orf18Q9UK00 162 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 TBC1D24Q9ULP9 559 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 SLC6A14Q9UN76 642 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 GRIP1Q9Y3R0 1128 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 MYO9BQ13459 2157 aa4.92□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF106Q9H2Y7 1883 aaKnown RBP4.92□□□□□ -1.62
CLDND1-208ENST00000503004 LOC100506127A0A0U1RQW1 187 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF99A8MXY4 864 aaPredicted RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 FAM220BPB1ANY3 271 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 SLC1A7O00341 560 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 KCNK5O95279 499 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 CDK1P06493 297 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 HBQ1P09105 142 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 TRAPPC2P0DI81 140 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 TRAPPC2BP0DI82 140 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 JUPP14923 745 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 PRPS1L1P21108 318 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 AZGP1P25311 298 aaKnown RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 FMO3P31513 532 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 BMP8BP34820 402 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 GDI2P50395 445 aaKnown RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 GBX2P52951 348 aaPredicted RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 POLR2LP62875 67 aaKnown RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 IL5RAQ01344 420 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 MEF2AQ02078 507 aaPredicted RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 RGS1Q08116 209 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ACSM2AQ08AH3 577 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 LRRC26Q2I0M4 334 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 HKDC1Q2TB90 917 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 PLPP4Q5VZY2 271 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ACSM2BQ68CK6 577 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 LAIR1Q6GTX8 287 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF425Q6IV72 752 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 PNCKQ6P2M8 343 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 AGTRAPQ6RW13 159 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ANGPTL8Q6UXH0 198 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 RNF165Q6ZSG1 346 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 BMP8AQ7Z5Y6 402 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 P2RY8Q86VZ1 359 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 PARP16Q8N5Y8 322 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 C1orf52Q8N6N3 182 aaKnown RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 RASGEF1AQ8N9B8 481 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 OR8H1Q8NGG4 311 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ING5Q8WYH8 240 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 RORBQ92753 470 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 UBE2FQ969M7 185 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 RAD51AP1Q96B01 352 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 TMEM159Q96B96 161 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 ANAPC16Q96DE5 110 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 LGALS12Q96DT0 336 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 SGTBQ96EQ0 304 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 TPD52L3Q96J77 140 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 CMTM3Q96MX0 182 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 LINC00052Q96N35 136 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 GAL3ST1Q99999 423 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 WRAP53Q9BUR4 548 aaKnown RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 TMEM121BQ9BXQ6 578 aaPredicted RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 SAP130Q9H0E3 1048 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 TTYH1Q9H313 450 aaPredicted RBP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 OSGEPL1Q9H4B0 414 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 RIBC2Q9H4K1 309 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 PRDM9Q9NQV7 894 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 SPHK2Q9NRA0 654 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.91□□□□□ -1.62
CLDND1-208ENST00000503004 PPP1R14DQ9NXH3 145 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 LAMP5Q9UJQ1 280 aa4.91□□□□□ -1.62
CLDND1-208ENST00000503004 DENND4CQ5VZ89 1909 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms