RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PSPHP78330 225 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 RPP38P78345 283 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PHEXP78562 749 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 CRYZQ08257 329 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 FUT7Q11130 342 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ASPHQ12797 758 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PDIA2Q13087 525 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SNTA1Q13424 505 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 NAB1Q13506 487 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF460Q14592 562 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 EBPQ15125 230 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 RPS6KA2Q15349 733 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PCBP2Q15366 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 OR4D1Q15615 310 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 KCTD19Q17RG1 926 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 GRTP1Q5TC63 336 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 NSUN5P2Q63ZY6 315 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 VASNQ6EMK4 673 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PAMR1Q6UXH9 720 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 C16orf47Q6ZP98 133 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SEM1Q6ZVN7 128 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 CLNKQ7Z7G1 428 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 LIX1LQ8IVB5 337 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ZBED8Q8IZ13 594 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF321PQ8N8H1 164 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 OR5M9Q8NGP3 310 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 MBD3L2Q8NHZ7 208 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ZPLD1Q8TCW7 415 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 TRPC4APQ8TEL6 797 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 REPS1Q96D71 796 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 HSPBAP1Q96EW2 488 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 RMND5BQ96G75 393 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 TMEM41AQ96HV5 264 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ATOH8Q96SQ7 321 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 KRT12Q99456 494 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 TIMP4Q99727 224 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF717Q9BY31 904 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ANGPTL4Q9BY76 406 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 WWTR1Q9GZV5 400 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 CALHM2Q9HA72 323 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 NMRAL1Q9HBL8 299 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SEMA4BQ9NPR2 832 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SMYD2Q9NRG4 433 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SNX15Q9NRS6 342 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 TXNDC16Q9P2K2 825 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SPRR3Q9UBC9 169 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ADAM29Q9UKF5 820 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 RPH3AQ9Y2J0 694 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 MTO1Q9Y2Z2 717 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ASB4Q9Y574 426 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 A0A0A6YYD5 115 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 IQANK1A0A1B0GTG1 560 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ATP6AP2A0A1C7CYW4 349 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 TCRBV9S1A1TA0A576 114 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 NCF1BA6NI72 391 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 NCF1CA8MVU1 366 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 EFCAB8A8MWE9 144 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 PLPP1O14494 284 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ATP6AP2O75787 350 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ACTL6AO96019 429 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 IL2RAP01589 272 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 RAF1P04049 648 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CLPSP04118 112 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 S100BP04271 92 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CELA3AP09093 270 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 RFPL3SP0C7P2 107 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 MTHFD2P13995 350 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 NCF1P14598 390 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CPN1P15169 458 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 KLK2P20151 261 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CHMP24386 653 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 BSGP35613 385 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 PIGAP37287 484 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 SSR2P43308 183 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CDK9P50750 372 aaKnown RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 NRG3P56975 720 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 PPP2R2AP63151 447 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CAV1Q03135 178 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 DUSP8Q13202 625 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 SLAMF1Q13291 335 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 FASTKD3Q14CZ7 662 aaKnown RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ACAP2Q15057 778 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 C18orf21Q32NC0 220 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ACSF3Q4G176 576 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 FNDC7Q5VTL7 733 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 TMEM198Q66K66 360 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ADNP2Q6IQ32 1131 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 RNF111Q6ZNA4 994 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ADGRE4PQ86SQ3 457 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 BIVMQ86UB2 503 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 PACS2Q86VP3 889 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 NUDT13Q86X67 352 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CDC20BQ86Y33 519 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 LRRC75A-AS1Q8N1F1 130 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 LIX1Q8N485 282 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 L3MBTL4Q8NA19 623 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 RELL2Q8NC24 303 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 OR7G1Q8NGA0 311 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 GOT1L1Q8NHS2 421 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 HUS1BQ8NHY5 278 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms