RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 FBXO8Q9NRD0 319 aa11.35□□□□□ -0.59
NUP54-202ENST00000502850 ZCCHC3Q9NUD5 404 aaKnown RBP11.35□□□□□ -0.59
NUP54-202ENST00000502850 TEX10Q9NXF1 929 aaPredicted RBP11.35□□□□□ -0.59
NUP54-202ENST00000502850 OR6C2Q9NZP2 312 aa11.35□□□□□ -0.59
NUP54-202ENST00000502850 SERGEFQ9UGK8 458 aa11.35□□□□□ -0.59
NUP54-202ENST00000502850 KCNK6Q9Y257 313 aa11.35□□□□□ -0.59
NUP54-202ENST00000502850 GPSM3Q9Y4H4 160 aa11.35□□□□□ -0.59
NUP54-202ENST00000502850 GPC6Q9Y625 555 aaPredicted RBP11.35□□□□□ -0.59
NUP54-202ENST00000502850 HEATR5BQ9P2D3 2071 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 SPTBN5Q9NRC6 3674 aaKnown RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 DSPPQ9NZW4 1301 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 PRAMEF25A6NGN4 478 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 UGT2B17O75795 530 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 SLITRK5O94991 958 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 VIPP01282 170 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 FHP07954 510 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 NR2F1P10589 423 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 OSMP13725 252 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 IL9P15248 144 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 IGFALSP35858 605 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 LTBRP36941 435 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 KIR2DL1P43626 348 aaPredicted RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 CLK1P49759 484 aaKnown RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 NCBP2P52298 156 aaKnown RBP eCLIP11.34□□□□□ -0.59
NUP54-202ENST00000502850 ADPRHP54922 357 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 FGL2Q14314 439 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 GANABQ14697 944 aaKnown RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 RPE65Q16518 533 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 DUSP7Q16829 419 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 TIGD6Q17RP2 521 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 SAMD14Q8IZD0 417 aaPredicted RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 TMCO5AQ8N6Q1 288 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 KBTBD8Q8NFY9 601 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 OR2L3Q8NG85 312 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 DYNC2LI1Q8TCX1 351 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 SLC22A18Q96BI1 424 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 MS4A6EQ96DS6 147 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 SH3YL1Q96HL8 342 aaPredicted RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 TMEM121BQ9BXQ6 578 aaPredicted RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 GLIPR2Q9H4G4 154 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 NMNAT1Q9HAN9 279 aaPredicted RBP11.34□□□□□ -0.59
NUP54-202ENST00000502850 RLIMQ9NVW2 624 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 CALML5Q9NZT1 146 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 FTSJ1Q9UET6 329 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 MOSPD1Q9UJG1 213 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 ACAD8Q9UKU7 415 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 NCKAP1Q9Y2A7 1128 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 DGKBQ9Y6T7 804 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 A3GALT2U3KPV4 340 aa11.34□□□□□ -0.59
NUP54-202ENST00000502850 XIRP2A4UGR9 3374 aa11.33□□□□□ -0.59
NUP54-202ENST00000502850 BDP1A6H8Y1 2624 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 IGKV1-8A0A0C4DH67 115 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 EFCAB9A8MZ26 197 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ANHXE9PGG2 379 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 J3KTA2 159 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 KPNA4O00629 521 aaPredicted RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 MAN2B1O00754 1011 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 PCDH17O14917 1159 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ERI3O43414 337 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 ASNA1O43681 348 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 PRICKLE3O43900 615 aaPredicted RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 LCMT2O60294 686 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 NADKO95544 446 aaPredicted RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 LAMP2P13473 410 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ELAVL4P26378 380 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 TIE1P35590 1138 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 BCL6P41182 706 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 SNRPGP62308 76 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 RPS26P62854 115 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 COX10Q12887 443 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 SLAMF1Q13291 335 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ILKQ13418 452 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ADAM15Q13444 863 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 PUM1Q14671 1186 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP54-202ENST00000502850 PTGES3Q15185 160 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 C2orf27AQ580R0 203 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 RPS26P11Q5JNZ5 115 aaPredicted RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 MEDAGQ5VYS4 303 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 FRMPD2BQ6IN97 320 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ZNF770Q6IQ21 691 aaPredicted RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 ABHD17CQ6PCB6 329 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 KLHL17Q6TDP4 642 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 WASH2PQ6VEQ5 465 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 PTCHD4Q6ZW05 846 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 USP30Q70CQ3 517 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 USP43Q70EL4 1123 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 SLC15A4Q8N697 577 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 CHPT1Q8WUD6 406 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 GGHQ92820 318 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 GTPBP3Q969Y2 492 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 LGALS12Q96DT0 336 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 ZHX1-C8orf76Q96EF9 292 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 MYADMQ96S97 322 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 OR51I1Q9H343 314 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 C3orf14Q9HBI5 128 aa11.33□□□□□ -0.6
NUP54-202ENST00000502850 DNAAF2Q9NVR5 837 aaKnown RBP11.33□□□□□ -0.6
NUP54-202ENST00000502850 ZNF226Q9NYT6 803 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms