RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 C19orf48Q6RUI8 117 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF793Q6ZN11 406 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ADCK2Q7Z695 626 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 HMGN2P46Q86SG4 172 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 CYP4Z2PQ8N1L4 340 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 CLIP4Q8N3C7 705 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 NATD1Q8N6N6 113 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FAM83FQ8NEG4 500 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SLC7A13Q8TCU3 470 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 CREB3L4Q8TEY5 395 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 RAB7BQ96AH8 199 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SLC6A18Q96N87 628 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 QRFPRQ96P65 431 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FUZQ9BT04 418 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 DPH7Q9BTV6 452 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 TAPBPLQ9BX59 468 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 PCBD2Q9H0N5 130 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 OR51I1Q9H343 314 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 GLIPR2Q9H4G4 154 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 MVB12BQ9H7P6 319 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 DDX31Q9H8H2 851 aaKnown RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FZD3Q9NPG1 666 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 INIPQ9NRY2 104 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 QPCTLQ9NXS2 382 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SEC14L3Q9UDX4 400 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SERGEFQ9UGK8 458 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ACAD8Q9UKU7 415 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 KLK4Q9Y5K2 254 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 DNAH14Q0VDD8 3507 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 C4orf51C9J302 202 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 H3BN98 237 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 TAF4O00268 1085 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FAAHO00519 579 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 MID1O15344 667 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 KIAA0513O60268 411 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 PCDH8O95206 1070 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 DNTTP04053 509 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 POU2F2P09086 479 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 PIPP12273 146 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SERPINB1P30740 379 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ILKQ13418 452 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 PIN1Q13526 163 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 NDUFAF5Q5TEU4 345 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FAM46CQ5VWP2 391 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SLX4IPQ5VYV7 408 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 C12orf73Q69YU5 71 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 OR4C11Q6IEV9 310 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 BCDIN3DQ7Z5W3 292 aaKnown RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FGF13Q92913 245 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SMARCD2Q92925 531 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF764Q96H86 408 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SLC35G5Q96KT7 338 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 C12orf66Q96MD2 445 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 AMDHD1Q96NU7 426 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 OPALINQ96PE5 141 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 FERD3LQ96RJ6 166 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 INSM2Q96T92 566 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 MACROD1Q9BQ69 325 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 OSGEPL1Q9H4B0 414 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 KLHL31Q9H511 634 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 NT5DC2Q9H857 520 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ACSS1Q9NUB1 689 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 P2RX2Q9UBL9 471 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 NDOR1Q9UHB4 597 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 A4GNTQ9UNA3 340 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 MGAT4BQ9UQ53 548 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 GPC6Q9Y625 555 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 RANBP2P49792 3224 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 GLOD5A6NK44 160 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 C5orf67F2Z3F1 127 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 CCRL2O00421 344 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 KMOO15229 486 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 OXSR1O95747 527 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TP53P04637 393 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 WASP42768 502 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 SSR2P43308 183 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 SEPHS1P49903 392 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 XKP51811 444 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 SNRPGP62308 76 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 IRF4Q15306 451 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 KIAA1161Q6NSJ0 714 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TUBA3EQ6PEY2 450 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 PARP16Q8N5Y8 322 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 XAGE5Q8WWM1 108 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 FAM210AQ96ND0 272 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF607Q96SK3 696 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TEX101Q9BY14 249 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 KCNK12Q9HB15 430 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 THAP10Q9P2Z0 257 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TRPC4Q9UBN4 977 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 CLEC2DQ9UHP7 191 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF229Q9UJW7 825 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ADAM29Q9UKF5 820 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 LSM2Q9Y333 95 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 LRIT2A6NDA9 550 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 AQP9O43315 295 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TPST2O60704 377 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms