RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 PRAMEF20Q5VT98 475 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 MRM1Q6IN84 353 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 RNF111Q6ZNA4 994 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 TMEM200AQ86VY9 491 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 MYLK4Q86YV6 388 aaPredicted RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 RIT1Q92963 219 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 REPS1Q96D71 796 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 ERVK-6Q9BXR3 956 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 ZNF717Q9BY31 904 aaPredicted RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 ZNF703Q9H7S9 590 aaPredicted RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 DDX31Q9H8H2 851 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 ACTR8Q9H981 624 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 PROK2Q9HC23 129 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 LYARQ9NX58 379 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 SPRR3Q9UBC9 169 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 ERVK-19Q9WJR5 959 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 UTP11Q9Y3A2 253 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 ASB4Q9Y574 426 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 CHCHD2Q9Y6H1 151 aaPredicted RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 PHF3Q92576 2039 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 MTORP42345 2549 aa16.78■□□□□ 0.28
ATPAF2-209ENST00000497871 A0A087X1B8 175 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 OR6C76A6NM76 312 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 WASHC1A8K0Z3 465 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 OR10H2O60403 315 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 PRKRAO75569 313 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 BSGP35613 385 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 DLX5P56178 289 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 SLC37A1P57057 533 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 SETDB1Q15047 1291 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 ACAP2Q15057 778 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 PFKFB4Q16877 469 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 FAM83EQ2M2I3 478 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 RIPPLY2Q5TAB7 128 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 CCDC25Q86WR0 208 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 CENPLQ8N0S6 344 aaPredicted RBP16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 FAM13CQ8NE31 585 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 OR10G3Q8NGC4 313 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 FBXO25Q8TCJ0 367 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 DOK4Q8TEW6 326 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 KCTD4Q8WVF5 259 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 GAL3ST4Q96RP7 486 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 WWTR1Q9GZV5 400 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 L3MBTL1Q9Y468 752 aa16.77■□□□□ 0.28
ATPAF2-209ENST00000497871 MED13LQ71F56 2210 aa16.77■□□□□ 0.27
ATPAF2-209ENST00000497871 A0A0A6YYD5 115 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 A0A1W2PR48 441 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 ANKRD33BA6NCL7 494 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 LRRC3CA6NJW4 275 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 TMPRSS11DO60235 418 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 EEDO75530 441 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 C2P06681 752 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 FAM58BPP0C7Q3 252 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 SLC35E2P0CK97 266 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 GFAPP14136 432 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 DNAJA1P31689 397 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 ART1P52961 327 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 ALDH18A1P54886 795 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 EBPQ15125 230 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 PCBP2Q15366 365 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 NTRK2Q16620 822 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 TBCELQ5QJ74 424 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 CYP20A1Q6UW02 462 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 ARSKQ6UWY0 536 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 TAGAPQ8N103 731 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 NEIL3Q8TAT5 605 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 TP53INP1Q96A56 240 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 DOHHQ9BU89 302 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 WDR41Q9HAD4 459 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 B4GALT7Q9UBV7 327 aa16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 CNOT11Q9UKZ1 510 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 TNPO3Q9Y5L0 923 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-209ENST00000497871 GLOD5A6NK44 160 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 HSPB2A8KAH6 182 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 CAPN14A8MX76 684 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 FOXE1O00358 373 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 SYT5O00445 386 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 NR2F6P10588 404 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 PEX19P40855 299 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 C2orf54Q08AI8 447 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 GTF2H2Q13888 395 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 TRADDQ15628 312 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 HSPB2Q16082 182 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 CPSF6Q16630 551 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 TMEM198Q66K66 360 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 GTF2H2CQ6P1K8 395 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 METTL2BQ6P1Q9 378 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 WDR53Q7Z5U6 358 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 ULK2Q8IYT8 1036 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 LIX1Q8N485 282 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 L3MBTL4Q8NA19 623 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 WDR20Q8TBZ3 569 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 JSRP1Q96MG2 331 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 RAB17Q9H0T7 212 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 IPPKQ9H8X2 491 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 PYCARDQ9ULZ3 195 aa16.75■□□□□ 0.27
ATPAF2-209ENST00000497871 C2orf92A0A1B0GVN3 265 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 AHRRA9YTQ3 701 aa16.74■□□□□ 0.27
ATPAF2-209ENST00000497871 TP53I11O14683 189 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms