RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ESRRAP11474 423 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 COL8A1P27658 744 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 PIK3R1P27986 724 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 TNFRSF8P28908 595 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 RFC3P40938 356 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 KRT6CP48668 564 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 SMSP52788 366 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 PRKAA2P54646 552 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 CDH13P55290 713 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 HSF1Q00613 529 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 GALNT1Q10472 559 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 ASPHQ12797 758 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 CSTF3Q12996 717 aaKnown RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 LCP2Q13094 533 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 EBPQ15125 230 aaKnown RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 PIGGQ5H8A4 983 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF678Q5SXM1 525 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 TEX35Q5T0J7 233 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 CCNYL2Q5T2Q4 361 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 C6orf163Q5TEZ5 329 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF787Q6DD87 383 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 ARHGAP11AQ6P4F7 1023 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 XKRXQ6PP77 449 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 DGAT2L6Q6ZPD8 337 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 GPRIN3Q6ZVF9 776 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 RPS27LQ71UM5 84 aaKnown RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 MRGPRGQ86SM5 289 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 SLC22A16Q86VW1 577 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 GALNT12Q8IXK2 581 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 TRPC4APQ8TEL6 797 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 MZB1Q8WU39 189 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.54□□□□□ -0.083e-6■■■■■ 50.8
HDAC4-213ENST00000496347 PPWD1Q96BP3 646 aaKnown RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 MTFMTQ96DP5 389 aaKnown RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 SPACA9Q96E40 222 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-213ENST00000496347 L3HYPDHQ96EM0 354 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 GAL3ST4Q96RP7 486 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 WWTR1Q9GZV5 400 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 ZDHHC11Q9H8X9 412 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 L2HGDHQ9H9P8 463 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 CXorf21Q9HAI6 301 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 SACM1LQ9NTJ5 587 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 DCHS2Q6V1P9 2916 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 A0A0G2JMM0 328 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 A0A1W2PPB8 328 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 A0A1W2PRS3 328 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 GOLGA6L10A6NI86 522 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 KIR3DP1A8MWS1 328 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 PRSS44E7EML9 344 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 E9PLN8 166 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 HRKO00198 91 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 DLX3O60479 287 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 SUPT7LO94864 414 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 GLSO94925 669 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-213ENST00000496347 PDYNP01213 254 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 ENO1P06733 434 aaKnown RBP14.53□□□□□ -0.08
HDAC4-213ENST00000496347 HSD17B3P37058 310 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 SLC37A1P57057 533 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF267Q14586 743 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF791Q3KP31 576 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-213ENST00000496347 SGO1Q5FBB7 561 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 FGD2Q7Z6J4 655 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 LRRN4CLQ8ND94 238 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 AGAP11Q8TF27 550 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 CCDC126Q96EE4 140 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 VKORC1Q9BQB6 163 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 TTTY12Q9BZ98 90 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 SH2D2AQ9NP31 389 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 FARSBQ9NSD9 589 aaKnown RBP14.53□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF225Q9UK10 706 aa14.53□□□□□ -0.08
HDAC4-213ENST00000496347 C1orf226A1L170 272 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 CCDC151A5D8V7 595 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 GOLGA8RI6L899 631 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 MANBAO00462 879 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PPP6CO00743 305 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 HNRNPRO43390 633 aaKnown RBP14.52□□□□□ -0.09
HDAC4-213ENST00000496347 CDC40O60508 579 aaKnown RBP eCLIP14.52□□□□□ -0.09
HDAC4-213ENST00000496347 ZNF354AO60765 605 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-213ENST00000496347 GLRA3O75311 464 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 OR4F21O95013 312 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 NADKO95544 446 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-213ENST00000496347 CLPSP04118 112 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 P04436 131 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 FBXO45P0C2W1 286 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PYGBP11216 843 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 CPMP14384 443 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 TSPAN8P19075 237 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 IMPDH1P20839 514 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PTGS2P35354 604 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PKNOX1P55347 436 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 NAA20P61599 178 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PPIAP62937 165 aaKnown RBP14.52□□□□□ -0.09
HDAC4-213ENST00000496347 TRA2BP62995 288 aaKnown RBP14.52□□□□□ -0.09
HDAC4-213ENST00000496347 ADORA2A-AS1P86434 159 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PLGLB1Q02325 96 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 UNC50Q53HI1 259 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 PAOXQ6QHF9 649 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 FAM47EQ6ZV65 393 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 FAM109AQ8N4B1 249 aa14.52□□□□□ -0.09
HDAC4-213ENST00000496347 CDYL2Q8N8U2 506 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms