RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ANTXRLA6NF34 631 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 DUXAA6NLW8 204 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PRR33A8MZF0 331 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 UPK1AO00322 258 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 BTN3A3O00478 584 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 SLC16A6O15403 523 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 EMC8O43402 210 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 SLC28A2O43868 658 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PRICKLE3O43900 615 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 TMPRSS11DO60235 418 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 MRPS14O60783 128 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 GADD45GO95257 159 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 OXSR1O95747 527 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 B3GALT4O96024 378 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 SEMG1P04279 462 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 FESP07332 822 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 CCDC159P0C7I6 412 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 NR2F1P10589 423 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 UGT2B7P16662 529 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 RHCEP18577 417 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 MATN1P21941 496 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ATP5A1P25705 553 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 RYKP34925 604 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PEX19P40855 299 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 HLCSP50747 726 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 TNFRSF17Q02223 184 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 RELAQ04206 551 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 NDUFA9Q16795 377 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ALG11Q2TAA5 492 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 CNPY1Q3B7I2 92 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 NADK2Q4G0N4 442 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ZNF691Q5VV52 312 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PRAMEF8Q5VWM4 474 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PRAMEF7Q5VXH5 474 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 KIAA1614Q5VZ46 1190 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 SLC48A1Q6P1K1 146 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 TNFAIP8L2Q6P589 184 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 ZNF773Q6PK81 442 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 RBM44Q6ZP01 1051 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 C6orf120Q7Z4R8 191 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PLD3Q8IV08 490 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 P3H2Q8IVL5 708 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ACOT4Q8N9L9 421 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 TTC29Q8NA56 475 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 OR13H1Q8NG92 308 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 OR10G2Q8NGC3 310 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PSMA8Q8TAA3 256 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 SUN3Q8TAQ9 357 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 GPBAR1Q8TDU6 330 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ADAMTS18Q8TE60 1221 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 PHF10Q8WUB8 498 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 TOE1Q96GM8 510 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 BMFQ96LC9 184 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 NELL2Q99435 816 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 SORBS1Q9BX66 1292 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 BTBD2Q9BX70 525 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 GPR174Q9BXC1 333 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ZNF717Q9BY31 904 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 TMEM168Q9H0V1 697 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ABCG4Q9H172 646 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 CXorf36Q9H7Y0 433 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 NTN4Q9HB63 628 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 KRCC1Q9NPI7 259 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 C1GALT1Q9NS00 363 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 TEX10Q9NXF1 929 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 KLHL28Q9NXS3 571 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 WSB2Q9NYS7 404 aaPredicted RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 APOBEC3BQ9UH17 382 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 FBXL21Q9UKT6 434 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 RAB23Q9ULC3 237 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 DUSP12Q9UNI6 340 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ABCG2Q9UNQ0 655 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 EXO1Q9UQ84 846 aaKnown RBP6.55□□□□□ -1.36
USP39-219ENST00000496047 PLEKHM1Q9Y4G2 1056 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 U3KQV3 271 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 A0A0G2JN53 185 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 SPTY2D1-AS1A0A0U1RR47 76 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 BLACEA4D250 179 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 H0Y8X5 98 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 M0QX08 132 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF701M0R085 212 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 DLGAP1O14490 977 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 SCAMP1O15126 338 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CASC3O15234 703 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 TNFSF14O43557 240 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 NDUFB5O43674 189 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ASNA1O43681 348 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 LCMT2O60294 686 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 MPZL2O60487 215 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 UGT2B17O75795 530 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 SOX30O94993 753 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CCNB2O95067 398 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 AIFM1O95831 613 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ANGPTL1O95841 491 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 OPN1SWP03999 348 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 FUCA1P04066 466 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 RPLP1P05386 114 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF888P0CJ79 500 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 POLR2CP19387 275 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 MAGP20916 626 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms