RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	DNAJB8	Q8NHS0	232 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	FAM76A	Q8TAV0	307 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	SLC2A12	Q8TD20	617 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZNF721	Q8TF20	911 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	FAR1	Q8WVX9	515 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	RIT1	Q92963	219 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	PPWD1	Q96BP3	646 aa	Known RBP	11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZIM3	Q96PE6	472 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	LRFN1	Q9P244	771 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	MYOT	Q9UBF9	498 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	WBP11	Q9Y2W2	641 aa	Known RBP	11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	ACTL7B	Q9Y614	415 aa		11.5	□□□□□ -0.57
MRPL55-233	ENST00000495899	GOLGA6L10	A6NI86	522 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	TMEM200C	A6NKL6	621 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	NPIPB8	E9PQR5	432 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	AZIN1	O14977	448 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	ITGA10	O75578	1167 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	RSL1D1	O76021	490 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	NEURL1	O76050	574 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	RASAL1	O95294	804 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	CBX6	O95503	412 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	CHEK2	O96017	543 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	CRYAB	P02511	175 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	BPGM	P07738	259 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SP1	P08047	785 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	MYZAP	P0CAP1	466 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	CREB1	P16220	341 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	ETV4	P43268	484 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SSR4	P51571	173 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	XK	P51811	444 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	RNF4	P78317	190 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	RAE1	P78406	368 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	HMGCS1	Q01581	520 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	HEPACAM	Q14CZ8	416 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	IMPG1	Q17R60	797 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SPDYA	Q5MJ70	313 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SPINK14	Q6IE38	97 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SLC25A25	Q6KCM7	469 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	CLYBL	Q8N0X4	340 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	TMEM156	Q8N614	296 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	TMEM178A	Q8NBL3	297 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	GRHL3	Q8TE85	626 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	THAP3	Q8WTV1	239 aa	Predicted RBP	11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	UCN3	Q969E3	161 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	TMEM125	Q96AQ2	219 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SCMH1	Q96GD3	660 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	APIP	Q96GX9	242 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	C5orf34	Q96MH7	638 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SIGLEC12	Q96PQ1	595 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	SHCBP1L	Q9BZQ2	653 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	STMN4	Q9H169	189 aa	Predicted RBP	11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	ANKRD10	Q9NXR5	420 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	CES1P1	Q9UKY3	287 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	NTNG1	Q9Y2I2	539 aa		11.49	□□□□□ -0.57
MRPL55-233	ENST00000495899	DOCK10	Q96BY6	2186 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	GNG14	A0A1W2PPG7	69 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	OR6C76	A6NM76	312 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	SLC28A1	O00337	649 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	TM9SF1	O15321	606 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	BIRC5	O15392	142 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	RGS14	O43566	566 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	PCDH7	O60245	1069 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	OR2J2	O76002	312 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ATP1B1	P05026	303 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ANXA4	P09525	319 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	CPM	P14384	443 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	POR	P16435	677 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	CSNK2A2	P19784	350 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	PRPH2	P23942	346 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	SERPINB3	P29508	390 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	TIA1	P31483	386 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZNF267	Q14586	743 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	MPEG1	Q2M385	716 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ARL13A	Q5H913	290 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	KANK2	Q63ZY3	851 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	SCIMP	Q6UWF3	145 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	DGAT2L6	Q6ZPD8	337 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZNF321P	Q8N8H1	164 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	OR6Y1	Q8NGX8	325 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	NUBPL	Q8TB37	319 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	TAAR6	Q96RI8	345 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	CENPH	Q9H3R5	247 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	CXorf21	Q9HAI6	301 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	TNFRSF12A	Q9NP84	129 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	EHD3	Q9NZN3	535 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	DLGAP4	Q9Y2H0	992 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	CCL27	Q9Y4X3	112 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZNF780B	Q9Y6R6	833 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	MYO18B	Q8IUG5	2567 aa		11.48	□□□□□ -0.57
MRPL55-233	ENST00000495899	PRKN	O60260	465 aa	Predicted RBP	11.47	□□□□□ -0.57
MRPL55-233	ENST00000495899	NME2P1	O60361	137 aa		11.47	□□□□□ -0.57
MRPL55-233	ENST00000495899	SLC25A12	O75746	678 aa		11.47	□□□□□ -0.57
MRPL55-233	ENST00000495899	SNUPN	O95149	360 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-233	ENST00000495899	ZWINT	O95229	277 aa		11.47	□□□□□ -0.57
MRPL55-233	ENST00000495899	EDN3	P14138	238 aa		11.47	□□□□□ -0.57
MRPL55-233	ENST00000495899	NME2	P22392	152 aa		11.47	□□□□□ -0.57

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