RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TRBV5-4A0A0C4DH59 114 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 PGRMC2O15173 223 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 IDH3BO43837 385 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 LCMT2O60294 686 aaKnown RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 ADH1CP00326 375 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 CTSAP10619 480 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 CENPAP49450 140 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.36
GPC1-209ENST00000495100 BCL7AQ4VC05 210 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 LRIF1Q5T3J3 769 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 FRMPD2BQ6IN97 320 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 IL20RBQ6UXL0 311 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 PLEKHM3Q6ZWE6 761 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 RNF44Q7L0R7 432 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SLC30A8Q8IWU4 369 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 DNAJC22Q8N4W6 341 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 OXR1Q8N573 874 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 OR4K5Q8NGD3 323 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 OR51G2Q8NGK0 314 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 OR51A7Q8NH64 312 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 PIGKQ92643 395 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 CHFRQ96EP1 664 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 TRMT2BQ96GJ1 504 aaKnown RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 MED20Q9H944 212 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GPN2Q9H9Y4 310 aaPredicted RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.78□□□□□ -0.36
GPC1-209ENST00000495100 SCN5AQ14524 2016 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 FABP12A6NFH5 140 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 GFYI3L273 518 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 ARHGAP33O14559 1287 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 JRKO75564 520 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 CYP17A1P05093 508 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 HMGN2P05204 90 aaKnown RBP12.77□□□□□ -0.36
GPC1-209ENST00000495100 PSKH1P11801 424 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 TYRP1P17643 537 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 CDKN3Q16667 212 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 PRSS53Q2L4Q9 553 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 ATAD3BQ5T9A4 648 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 UXS1Q8NBZ7 420 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 ADAMTS15Q8TE58 950 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 FKBP10Q96AY3 582 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 GPATCH2Q9NW75 528 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 AP3M1Q9Y2T2 418 aa12.77□□□□□ -0.36
GPC1-209ENST00000495100 WBP11Q9Y2W2 641 aaKnown RBP12.77□□□□□ -0.36
GPC1-209ENST00000495100 PLPP1O14494 284 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 PLD2O14939 933 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 REM1O75628 298 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 OXSR1O95747 527 aaPredicted RBP12.77□□□□□ -0.37
GPC1-209ENST00000495100 ZNF30P17039 623 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
GPC1-209ENST00000495100 PTX3P26022 381 aaPredicted RBP12.77□□□□□ -0.37
GPC1-209ENST00000495100 CD6P30203 668 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 GGT2P36268 569 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 SRSF5Q13243 272 aaKnown RBP12.77□□□□□ -0.37
GPC1-209ENST00000495100 IRF5Q13568 498 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 SEC23BQ15437 767 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 SPHARQ15513 63 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 KCNJ8Q15842 424 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 ZSWIM7Q19AV6 140 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 DEFB110Q30KQ9 67 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 FIGNL1Q6PIW4 674 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 USP43Q70EL4 1123 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 GALNT12Q8IXK2 581 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 RAB42Q8N4Z0 105 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 WDR20Q8TBZ3 569 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 TEX47Q8TBZ9 253 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 STARD8Q92502 1023 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 TSACCQ96A04 125 aaPredicted RBP12.77□□□□□ -0.37
GPC1-209ENST00000495100 SLAMF7Q9NQ25 335 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 SPATA7Q9P0W8 599 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 N6AMT1Q9Y5N5 214 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.37
GPC1-209ENST00000495100 ZDBF2Q9HCK1 2354 aa12.77□□□□□ -0.37
GPC1-209ENST00000495100 H0Y8X5 98 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 FURINP09958 794 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 PVRP15151 417 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 PTPN6P29350 595 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 OTPQ5XKR4 325 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 TRIQKQ629K1 86 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 VRK2Q86Y07 508 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 C7orf61Q8IZ16 206 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 CADM2Q8N3J6 435 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 OR10H4Q8NGA5 316 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 OR4F15Q8NGB8 312 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 OR52N2Q8NGI0 321 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 PCNPQ8WW12 178 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 MAGEB10Q96LZ2 347 aaPredicted RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 MAGIXQ9H6Y5 334 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 WDR26Q9H7D7 661 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 MBNL1Q9NR56 388 aaKnown RBP12.76□□□□□ -0.37
GPC1-209ENST00000495100 INIPQ9NRY2 104 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 TAAR2Q9P1P5 351 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 CACNA1EQ15878 2313 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 TSC2P49815 1807 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 SLC16A6O15403 523 aa12.76□□□□□ -0.37
GPC1-209ENST00000495100 MAGEB4O15481 346 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms