RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 B3GNT6Q6ZMB0 384 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 GOLGA7Q7Z5G4 137 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 C9orf40Q8IXQ3 194 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 CLYBLQ8N0X4 340 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 WDR20Q8TBZ3 569 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 TRPC4APQ8TEL6 797 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 GPR78Q96P69 363 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 NTMT1Q9BV86 223 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 CNPPD1Q9BV87 410 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 SORBS1Q9BX66 1292 aaKnown RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 EXO5Q9H790 373 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 NOL11Q9H8H0 719 aaKnown RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ZFP64Q9NPA5 681 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ACKR4Q9NPB9 350 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 CPSF2Q9P2I0 782 aaKnown RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 RNF6Q9Y252 685 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 TRGV5A0A0B4J1U4 118 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 C2orf92A0A1B0GVN3 265 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ATP6AP2A0A1C7CYW4 349 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 A0A1W2PR48 441 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ESYT3A0FGR9 886 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 CDH16O75309 829 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ATP6AP2O75787 350 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ALDOAP04075 364 aaKnown RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 CCL3P10147 92 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 GMPRP36959 345 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ZFP36L2P47974 494 aaKnown RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 DNASE1L1P49184 302 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 TMED10P49755 219 aaKnown RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 NRG3P56975 720 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 SLC37A1P57057 533 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 HERVK_113P63132 956 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ERVK-8P63133 956 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 TLE4Q04727 773 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 IFT88Q13099 833 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 GLE1Q53GS7 698 aaKnown RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 TECRLQ5HYJ1 363 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 EMC4Q5J8M3 183 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 FRG2Q64ET8 278 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 TMEM198Q66K66 360 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 NCCRP1Q6ZVX7 275 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 FBXW8Q8N3Y1 598 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 MARVELD2Q8N4S9 558 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 PTGR2Q8N8N7 351 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 OR4K14Q8NGD5 310 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 OR10Q1Q8NGQ4 319 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 SLC44A1Q8WWI5 657 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 FRG2BQ96QU4 278 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 SECISBP2Q96T21 854 aaKnown RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 TTYH2Q9BSA4 534 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ERVK-6Q9BXR3 956 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF717Q9BY31 904 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 WWTR1Q9GZV5 400 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 PNPLA3Q9NST1 481 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 TUBA8Q9NY65 449 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-205ENST00000492851 PSME2Q9UL46 239 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 ERVK-19Q9WJR5 959 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 CFL2Q9Y281 166 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 RNF11Q9Y3C5 154 aa11.49□□□□□ -0.57
COL6A1-205ENST00000492851 G3V3Y1 287 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 TMPRSS11DO60235 418 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
COL6A1-205ENST00000492851 EEDO75530 441 aaKnown RBP11.48□□□□□ -0.57
COL6A1-205ENST00000492851 URI1O94763 535 aaPredicted RBP11.48□□□□□ -0.57
COL6A1-205ENST00000492851 TOXO94900 526 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 SNX4O95219 450 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 SIX3O95343 332 aaPredicted RBP11.48□□□□□ -0.57
COL6A1-205ENST00000492851 PIGAP37287 484 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 PEX19P40855 299 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 NEK2P51955 445 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 NUP107P57740 925 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 NTRK2Q16620 822 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 GGTA1PQ4G0N0 100 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 CES4AQ5XG92 561 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 MILR1Q7Z6M3 343 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 LIX1Q8N485 282 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 RNF175Q8N4F7 328 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 FAM13CQ8NE31 585 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 OR7G1Q8NGA0 311 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 OR5M9Q8NGP3 310 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 ISL2Q96A47 359 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 PHF21BQ96EK2 531 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 GAL3ST4Q96RP7 486 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 MRPL57Q9BQC6 102 aaKnown RBP11.48□□□□□ -0.57
COL6A1-205ENST00000492851 ELOVL6Q9H5J4 265 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 NINJ2Q9NZG7 142 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 KCNN3Q9UGI6 736 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF180Q9UJW8 692 aa11.48□□□□□ -0.57
COL6A1-205ENST00000492851 A0A0G2JMM0 328 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 A0A1W2PPB8 328 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 A0A1W2PRS3 328 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 GOLGA6L10A6NI86 522 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 GLOD5A6NK44 160 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 KIR3DP1A8MWS1 328 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms