RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 M0QX08 132 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 SYT5O00445 386 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 UGDHO60701 494 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 NCF1P14598 390 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 IDO1P14902 403 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CD22P20273 847 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CPN2P22792 545 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CRABP2P29373 138 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 SERPINB3P29508 390 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 SPRP35270 261 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 PIK3CBP42338 1070 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 MSH2P43246 934 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 HSPA7P48741 367 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 RAB10P61026 200 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 PLIN5Q00G26 463 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FOLH1Q04609 750 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CALCOCO2Q13137 446 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CHIT1Q13231 466 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 HSPB2Q16082 182 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF750Q32MQ0 723 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 C18orf21Q32NC0 220 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 GRTP1Q5TC63 336 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 KHDRBS2Q5VWX1 349 aaKnown RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 OR4C11Q6IEV9 310 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 SYT10Q6XYQ8 523 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF793Q6ZN11 406 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 GPR180Q86V85 440 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CCDC71Q8IV32 467 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 ST13P4Q8IZP2 240 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 LRRC25Q8N386 305 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FBXW8Q8N3Y1 598 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 OR7G3Q8NG95 312 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 UBTD2Q8WUN7 234 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 RGMAQ96B86 450 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 LRRC46Q96FV0 321 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FBXL20Q96IG2 436 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 DGAT2Q96PD7 388 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FOXC2Q99958 501 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 MAPKAP1Q9BPZ7 522 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 UCK2Q9BZX2 261 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 CXXC4Q9H2H0 198 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 LDAHQ9H6V9 325 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 RPF2Q9H7B2 306 aaKnown RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 NMRAL1Q9HBL8 299 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 ZFP64Q9NPA5 681 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 UBAP1Q9NZ09 502 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 WHRNQ9P202 907 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FOXD3Q9UJU5 478 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 RNF112Q9ULX5 631 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 BOKQ9UMX3 212 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FAM215AQ9Y5M1 114 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 TRGV5A0A0B4J1U4 118 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 A0A0B4J203 849 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 A0A0G2JNJ9 132 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 FAM90A27PA6NNH2 459 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SYCE1LA8MT33 242 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 AHRRA9YTQ3 701 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 K7EPI3 171 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 CCNT2O60583 730 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 DIAPH2O60879 1101 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 KERAO60938 352 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 LDB3O75112 727 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 ZWINTO95229 277 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 GOSR1O95249 250 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 ETHE1O95571 254 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 RPSAP08865 295 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 ALOX15P16050 662 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 EPB42P16452 691 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 EPORP19235 508 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 PTX3P26022 381 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 HSD3B2P26439 372 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 BUD31P41223 144 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SSR2P43308 183 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 MAGEA5P43359 124 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 RPL21P46778 160 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 PHEXP78562 749 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 CAV1Q03135 178 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 MRPL28Q13084 256 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SLAMF1Q13291 335 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 NAB1Q13506 487 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 CUL3Q13618 768 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 FASTKD3Q14CZ7 662 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 OR4D1Q15615 310 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 FBXL19-AS1Q494R0 122 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 C1orf185Q5T7R7 199 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 LIPJQ5W064 366 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 NXNQ6DKJ4 435 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 RTL6Q6ICC9 239 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 GRHL2Q6ISB3 625 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF585AQ6P3V2 769 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 FIP1L1Q6UN15 594 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 MAATS1Q7Z4T9 603 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 ISCA2Q86U28 154 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SLC7A5P1Q8MH63 180 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms