RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZNF227Q86WZ6 799 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 DDIASQ8IXT1 998 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 SLC5A8Q8N695 610 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 FAM98AQ8NCA5 519 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 PLPP5Q8NEB5 264 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 M1APQ8TC57 530 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 SCMH1Q96GD3 660 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 FRMD6Q96NE9 622 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 LYRM4Q9HD34 91 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 VTI1BQ9UEU0 232 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 PHF11Q9UIL8 331 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 TINAGQ9UJW2 476 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 PSME2Q9UL46 239 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 ENTPD4Q9Y227 616 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 FIS1Q9Y3D6 152 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 PCNX1Q96RV3 2341 aa10.29□□□□□ -0.76
TMEM39A-211ENST00000491685 HIVEP1P15822 2718 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 FAM227AF5H4B4 570 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 SAP18O00422 153 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 SH3BGRLO75368 114 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 SEC22BO75396 215 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 NEURL1O76050 574 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 CHRNGP07510 517 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 PCSK2P16519 638 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 MAOAP21397 527 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 CPN2P22792 545 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ATP5A1P25705 553 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 TPP2P29144 1249 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 HNRNPH1P31943 449 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 BUD31P41223 144 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 GSTM5P46439 218 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 HK2P52789 917 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 OR4D2P58180 307 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 HSF1Q00613 529 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 BTKQ06187 659 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ACTN3Q08043 901 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ACSM2AQ08AH3 577 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 MEP1AQ16819 746 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 SPIN4Q56A73 249 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ACSM2BQ68CK6 577 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 RNF165Q6ZSG1 346 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 GALNTL5Q7Z4T8 443 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 VN1R5Q7Z5H4 357 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 GPR180Q86V85 440 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 NUDT13Q86X67 352 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 WDR75Q8IWA0 830 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 LGI4Q8N135 537 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 EID3Q8N140 333 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 METTL4Q8N3J2 472 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ZCCHC7Q8N3Z6 543 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ACOT4Q8N9L9 421 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 OR6Y1Q8NGX8 325 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 TBC1D20Q96BZ9 403 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 LPAR4Q99677 370 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 FAIM2Q9BWQ8 316 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 DDX31Q9H8H2 851 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 NECTIN3Q9NQS3 549 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 LYARQ9NX58 379 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ZDHHC2Q9UIJ5 367 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 ZNF225Q9UK10 706 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 WBP11Q9Y2W2 641 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 PCDHGB6Q9Y5F9 930 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 EML6Q6ZMW3 1958 aa10.28□□□□□ -0.76
TMEM39A-211ENST00000491685 MED13LQ71F56 2210 aa10.27□□□□□ -0.76
TMEM39A-211ENST00000491685 GTF3C1Q12789 2109 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 IGKV3D-11A0A0A0MRZ8 115 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 A0A0G2JN53 185 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 ASPDHA6ND91 283 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 TRPC5OSA6NMA1 111 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 A8MUA0 341 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 SLC19A2O60779 497 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 RSL1D1O76021 490 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 KLK1P06870 262 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 SNRPB2P08579 225 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 CD46P15529 392 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 DDX5P17844 614 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 MAPK1P28482 360 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 PPP2R1BP30154 601 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 MDH1P40925 334 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 RAB38P57729 211 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 TRA2BP62995 288 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 BST1Q10588 318 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 MAD2L1Q13257 205 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 RUNX2Q13950 521 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 RNFT1Q5M7Z0 435 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 KANK2Q63ZY3 851 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 CLEC6AQ6EIG7 209 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 SCIMPQ6UWF3 145 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 MRGPRGQ86SM5 289 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 SIAH3Q8IW03 269 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 CHERPQ8IWX8 916 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 MCEMP1Q8IX19 187 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 ZNF595Q8IYB9 648 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 TMEM178AQ8NBL3 297 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 NFAM1Q8NET5 270 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 AGR3Q8TD06 166 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 ELP5Q8TE02 316 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 CHTF18Q8WVB6 975 aa10.27□□□□□ -0.77
TMEM39A-211ENST00000491685 PPP3R2Q96LZ3 170 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms