RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 NKX2-5P52952 324 aaPredicted RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 TAS2R38P59533 333 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 DUSP2Q05923 314 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 MAP4K2Q12851 820 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 TBCEQ15813 527 aaPredicted RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 STEAP3Q658P3 488 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 ZNF793Q6ZN11 406 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 UBE3DQ7Z6J8 389 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 DEPDC4Q8N2C3 294 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 HDDC3Q8N4P3 179 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 POP5Q969H6 163 aaKnown RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 CXorf40BQ96DE9 158 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 WDR34Q96EX3 536 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 PDXPQ96GD0 296 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 POLR2J3Q9H1A7 115 aaKnown RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 EPHX3Q9H6B9 360 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 CARD8Q9Y2G2 431 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 C4orf51C9J302 202 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 TLR4O00206 839 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 ERI3O43414 337 aaKnown RBP14.88□□□□□ -0.03
BRD9-208ENST00000489816 SPNP16150 400 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 DRD3P35462 400 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 NCBP2P52298 156 aaKnown RBP eCLIP14.88□□□□□ -0.03
BRD9-208ENST00000489816 MLF2Q15773 248 aaPredicted RBP14.88□□□□□ -0.03
BRD9-208ENST00000489816 C2orf27AQ580R0 203 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 CLEC12AQ5QGZ9 265 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 TMEM240Q5SV17 173 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 C18orf63Q68DL7 685 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 PLEKHG7Q6ZR37 379 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 HOMEZQ8IX15 550 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 OR5K2Q8NHB8 316 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 SYNPO2LQ9H987 977 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 THSD1Q9NS62 852 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 GIN1Q9NXP7 522 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 IGKV1-8A0A0C4DH67 115 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 CLDN24A6NM45 220 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 ARHGAP33O14559 1287 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 KIAA0355O15063 1070 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 NDUFS4O43181 175 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 CA3P07451 260 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 SNRPNP63162 240 aaKnown RBP14.88□□□□□ -0.03
BRD9-208ENST00000489816 E2F2Q14209 437 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 TMEM31Q5JXX7 168 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 LCTLQ6UWM7 567 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 UBE2E3Q969T4 207 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 ZNF514Q96K75 400 aaPredicted RBP14.88□□□□□ -0.03
BRD9-208ENST00000489816 BBS4Q96RK4 519 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 AICDAQ9GZX7 198 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 GLIPR2Q9H4G4 154 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 MARCH7Q9H992 704 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 CLN6Q9NWW5 311 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 PRKAG2Q9UGJ0 569 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 CA5BQ9Y2D0 317 aa14.88□□□□□ -0.03
BRD9-208ENST00000489816 A0A1W2PPV9 198 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 CH25HO95992 272 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 TGM1P22735 817 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 ELAVL4P26378 380 aaKnown RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 PIP5KL1Q5T9C9 394 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 C1orf53Q5VUE5 145 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 TMIEQ8NEW7 156 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 GPA33Q99795 319 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 FBXO8Q9NRD0 319 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 GPR34Q9UPC5 381 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 METTL15A6NJ78 407 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 HOXC11O43248 304 aaPredicted RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 H1F0P07305 194 aaKnown RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 TIE1P35590 1138 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 XKP51811 444 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 HNRNPFP52597 415 aaKnown RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 TPTEP56180 551 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 GPAT3Q53EU6 434 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 METRNLQ641Q3 311 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 TMEM107Q6UX40 140 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 FBXO15Q8NCQ5 510 aaPredicted RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 DENND6BQ8NEG7 585 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 WFIKKN2Q8TEU8 576 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 ASB16Q96NS5 453 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 UCK2Q9BZX2 261 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 NUAK2Q9H093 628 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 SPHK1Q9NYA1 384 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 FTSJ1Q9UET6 329 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 MAPRE3Q9UPY8 281 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 B3GNT3Q9Y2A9 372 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 NTNG1Q9Y2I2 539 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 SLC27A6Q9Y2P4 619 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 ATG4BQ9Y4P1 393 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 C17orf113A0A1B0GUU1 675 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 VEGFDO43915 354 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 NFATC1O95644 943 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 FGF19O95750 216 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 S100A5P33763 92 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 RPL3P39023 403 aaKnown RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 PPP5CP53041 499 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 CSNK1G2P78368 415 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 KCNC4Q03721 635 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 FGL2Q14314 439 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 IQCHQ86VS3 1027 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 NUDT13Q86X67 352 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 PARP16Q8N5Y8 322 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms