RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 ERVK-8P63133 956 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 PTGR1Q14914 329 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 HEPACAMQ14CZ8 416 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 LTB4RQ15722 352 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 AGAP7PQ5VUJ5 663 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 IL23RQ5VWK5 629 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 IKBIPQ70UQ0 350 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 CRLF3Q8IUI8 442 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 ELP5Q8TE02 316 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 THAP3Q8WTV1 239 aaPredicted RBP13.43□□□□□ -0.26
HLA-F-229ENST00000489502 DAZLQ92904 295 aaKnown RBP13.43□□□□□ -0.26
HLA-F-229ENST00000489502 VMP1Q96GC9 406 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 RBM18Q96H35 190 aaKnown RBP13.43□□□□□ -0.26
HLA-F-229ENST00000489502 C7orf26Q96N11 449 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 AGAP4Q96P64 663 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 SMAD5Q99717 465 aaKnown RBP13.43□□□□□ -0.26
HLA-F-229ENST00000489502 NPAS2Q99743 824 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 PELOQ9BRX2 385 aaKnown RBP13.43□□□□□ -0.26
HLA-F-229ENST00000489502 SLC25A18Q9H1K4 315 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 WDR55Q9H6Y2 383 aaPredicted RBP13.43□□□□□ -0.26
HLA-F-229ENST00000489502 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 MIEF1Q9NQG6 463 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 ERVK-19Q9WJR5 959 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 ENTPD4Q9Y227 616 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 SMG1Q96Q15 3661 aaKnown RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 DYNC1I1O14576 645 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 PRKNO60260 465 aaPredicted RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 F10P00742 488 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 CT62P0C5K7 136 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 NT5EP21589 574 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 EPHA3P29320 983 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 GPR143P51810 404 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 AP2B1P63010 937 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 NFATC3Q12968 1075 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF267Q14586 743 aaPredicted RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 SPRED3Q2MJR0 410 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF385BQ569K4 471 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 CRB2Q5IJ48 1285 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 JMJD6Q6NYC1 403 aaPredicted RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ISLR2Q6UXK2 745 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 PTRH1Q86Y79 214 aaKnown RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 GALNT12Q8IXK2 581 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 LRRC25Q8N386 305 aaPredicted RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 MORN4Q8NDC4 146 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ADCY4Q8NFM4 1077 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 PIWIL2Q8TC59 973 aaKnown RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 RIT1Q92963 219 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 FBXL20Q96IG2 436 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 MAGEB18Q96M61 343 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF681Q96N22 645 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 CXorf21Q9HAI6 301 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 SLC35C2Q9NQQ7 365 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 EHD3Q9NZN3 535 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 PPIEQ9UNP9 301 aaKnown RBP13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF451Q9Y4E5 1061 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 CSAG2Q9Y5P2 127 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF780BQ9Y6R6 833 aa13.42□□□□□ -0.26
HLA-F-229ENST00000489502 PORP16435 677 aaPredicted RBP13.41□□□□□ -0.26
HLA-F-229ENST00000489502 CSNK2A2P19784 350 aaPredicted RBP13.41□□□□□ -0.26
HLA-F-229ENST00000489502 SSTR4P31391 388 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 HPCAL1P37235 193 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 ASMTP46597 345 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 CLCN2P51788 898 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 DIO3P55073 304 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 MFAP5Q13361 173 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 C6orf163Q5TEZ5 329 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 FAM111BQ6SJ93 734 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 C16orf47Q6ZP98 133 aaPredicted RBP13.41□□□□□ -0.26
HLA-F-229ENST00000489502 BEST3Q8N1M1 668 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 SLC5A8Q8N695 610 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 KRTCAP2Q8N6L1 136 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 OR1N1Q8NGS0 311 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 OR9A2Q8NGT5 310 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF721Q8TF20 911 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 NUDT8Q8WV74 236 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 SENP5Q96HI0 755 aaPredicted RBP13.41□□□□□ -0.26
HLA-F-229ENST00000489502 BBS4Q96RK4 519 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 MFRPQ9BY79 579 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 DEFB126Q9BYW3 111 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 BRINP2Q9C0B6 783 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 SLAMF7Q9NQ25 335 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 GIMAP4Q9NUV9 329 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 PLA2G3Q9NZ20 509 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 NOP53Q9NZM5 478 aaKnown RBP13.41□□□□□ -0.26
HLA-F-229ENST00000489502 LUZP4Q9P127 313 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 COPS7AQ9UBW8 275 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 BSNQ9UPA5 3926 aa13.41□□□□□ -0.26
HLA-F-229ENST00000489502 TRPC5OSA6NMA1 111 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 TCP11X1B4DZS4 312 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 SLCO1B7G3V0H7 640 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF195O14628 629 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 SCAMP2O15127 329 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 DYRK3O43781 588 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 C1QL1O75973 258 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 CLPSP04118 112 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 IGKV3-11P04433 115 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms