RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 AHRP35869 848 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 RBMXP38159 391 aaKnown RBP13.54□□□□□ -0.24
UFD1-209ENST00000489406 ID2Q02363 134 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 FUT7Q11130 342 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 CYP1B1Q16678 543 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 GPSM1Q86YR5 675 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 MPP5Q8N3R9 675 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 OR14L1PQ8NHC6 308 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 C10orf105Q8TEF2 133 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 LPGAT1Q92604 370 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 PROX1Q92786 737 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 KAT2AQ92830 837 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 TP53INP1Q96A56 240 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 SENP5Q96HI0 755 aaPredicted RBP13.54□□□□□ -0.24
UFD1-209ENST00000489406 ADAD1Q96M93 576 aaKnown RBP13.54□□□□□ -0.24
UFD1-209ENST00000489406 NPLQ9BXD5 320 aaPredicted RBP13.54□□□□□ -0.24
UFD1-209ENST00000489406 DLGAP4Q9Y2H0 992 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 SLC22A20A6NK97 555 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 HRKO00198 91 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 CYR61O00622 381 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 PSTPIP1O43586 416 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 LDB3O75112 727 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 SERPINC1P01008 464 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 ESR1P03372 595 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 CD3EP07766 207 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 MPC1LP0DKB6 136 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
UFD1-209ENST00000489406 GRIA1P42261 906 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 MARCKSL1P49006 195 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 LHX2P50458 406 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
UFD1-209ENST00000489406 GGTLC2Q14390 218 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 CYHR1Q6ZMK1 362 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 STAC2Q6ZMT1 411 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 MCUQ8NE86 351 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 TRPV3Q8NET8 790 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 KBTBD8Q8NFY9 601 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 OR8K1Q8NGG5 319 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 OR1J4Q8NGS1 313 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 RDH11Q8TC12 318 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 HAUS8Q9BT25 410 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 RNF112Q9ULX5 631 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 PCDHGB1Q9Y5G3 927 aa13.53□□□□□ -0.24
UFD1-209ENST00000489406 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■□□□□ 10.1
UFD1-209ENST00000489406 A0A0A6YYJ9 748 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 SLCO1B7G3V0H7 640 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 B3GALT2O43825 422 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 IGKV3-11P04433 115 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 CCND1P24385 295 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 CASP3P42574 277 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 CLCN7P51798 805 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 CLDN18P56856 261 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 RPS6KA2Q15349 733 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 TTLL9Q3SXZ7 439 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 ANGPTL8Q6UXH0 198 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 DNAJC14Q6Y2X3 702 aaPredicted RBP13.52□□□□□ -0.25
UFD1-209ENST00000489406 PPP1R21Q6ZMI0 780 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 PIWIL4Q7Z3Z4 852 aaKnown RBP13.52□□□□□ -0.25
UFD1-209ENST00000489406 KATNAL2Q8IYT4 538 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 GIMAP7Q8NHV1 300 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 DOK4Q8TEW6 326 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 FIG4Q92562 907 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 SNF8Q96H20 258 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 TMEM41AQ96HV5 264 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 TACO1Q9BSH4 297 aaKnown RBP13.52□□□□□ -0.25
UFD1-209ENST00000489406 PRR14Q9BWN1 585 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 GRIP2Q9C0E4 1043 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 CHRAC1Q9NRG0 131 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 WWOXQ9NZC7 414 aa13.52□□□□□ -0.25
UFD1-209ENST00000489406 SERPINA6P08185 405 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 PYGBP11216 843 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 ZNF708P17019 499 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 LIM2P55344 173 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 GPS1Q13098 491 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 SERTAD2Q14140 314 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 RBBP5Q15291 538 aaKnown RBP13.51□□□□□ -0.25
UFD1-209ENST00000489406 AWAT1Q58HT5 328 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 CHMP1BQ7LBR1 199 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 DTX2Q86UW9 622 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 PEX13Q92968 403 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 C3orf49Q96BT1 292 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 CACNG6Q9BXT2 260 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
UFD1-209ENST00000489406 SERHLQ9NQF3 203 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 METRNQ9UJH8 293 aa13.51□□□□□ -0.25
UFD1-209ENST00000489406 PTBP2Q9UKA9 531 aaKnown RBP13.51□□□□□ -0.25
UFD1-209ENST00000489406 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 GOLGA8KD6RF30 607 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 RGS9O75916 674 aaPredicted RBP13.5□□□□□ -0.25
UFD1-209ENST00000489406 FESP07332 822 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 APEHP13798 732 aaKnown RBP13.5□□□□□ -0.25
UFD1-209ENST00000489406 GFRA1P56159 465 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 PCDH1Q08174 1060 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms