RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SORCS1Q8WY21 1168 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 PCTPQ9UKL6 214 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 FZD9O00144 591 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 RGS9O75916 674 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-209ENST00000489180 GLP1RP43220 463 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 NR4A2P43354 598 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 HERV-K104P61576 105 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 ZMYND11Q15326 602 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 USF2Q15853 346 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-209ENST00000489180 IQCF1Q8N6M8 205 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 OR8J1Q8NGP2 316 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 C9J4A7 227 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 HCRTR2O43614 444 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 OR2B3O76000 313 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 ANXA3P12429 323 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 CAPN3P20807 821 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 SNRPD2P62316 118 aaKnown RBP16.85■□□□□ 0.29
NPHP4-209ENST00000489180 TBC1D25Q3MII6 688 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 OR6C4Q8NGE1 309 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 OR56A3Q8NH54 315 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 FUBP1Q96AE4 644 aaKnown RBP16.85■□□□□ 0.29
NPHP4-209ENST00000489180 RBP7Q96R05 134 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 C11orf49Q9H6J7 331 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 MAGIXQ9H6Y5 334 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 SLC39A1Q9NY26 324 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 GPRC5BQ9NZH0 403 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 C10orf71Q711Q0 1435 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 GPR32O75388 356 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CSTAP01040 98 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 FHP07954 510 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 GNSP15586 552 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 DNASE1P24855 282 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ASPGQ86U10 573 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 OR4N5Q8IXE1 308 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 FAM46AQ96IP4 442 aaKnown RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 B3GAT2Q9NPZ5 323 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CAPN14A8MX76 684 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 HSPA12AO43301 675 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 EMC8O43402 210 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 SCO2O43819 266 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 RFPL2O75678 378 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 S1PR1P21453 382 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CARD17Q5XLA6 110 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 TTLL10Q6ZVT0 673 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ERN2Q76MJ5 926 aaKnown RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 GALNT6Q8NCL4 622 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 NPLQ9BXD5 320 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ABCG5Q9H222 651 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 PRTFDC1Q9NRG1 225 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF701Q9NV72 531 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ATXN7L1Q9ULK2 861 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 TRBV2A0A0J9YWF9 115 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 DNAJB5O75953 348 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CD68P34810 354 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CLDN8P56748 225 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 EFR3AQ14156 821 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 EIF2S3LQ2VIR3 472 aaKnown RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 TMEM53Q6P2H8 277 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 APCDD1Q8J025 514 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 SLC22A8Q8TCC7 542 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 YARS2Q9Y2Z4 477 aaKnown RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ZCWPW2A0A1B0GU75 182 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CRYZQ08257 329 aaKnown RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ALG10Q5BKT4 473 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 RPS26P11Q5JNZ5 115 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF550Q7Z398 422 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF584Q8IVC4 421 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 SLC5A8Q8N695 610 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 DRAXINQ8NBI3 349 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 L3HYPDHQ96EM0 354 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF717Q9BY31 904 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 OR2S2Q9NQN1 319 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 DKKL1Q9UK85 242 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CNOT11Q9UKZ1 510 aaKnown RBP16.84■□□□□ 0.29
NPHP4-209ENST00000489180 PADI2Q9Y2J8 665 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 CACNA1FO60840 1977 aa16.84■□□□□ 0.29
NPHP4-209ENST00000489180 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 CASRP41180 1078 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 SFRP4Q6FHJ7 346 aaPredicted RBP16.83■□□□□ 0.29
NPHP4-209ENST00000489180 TSPAN33Q86UF1 283 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 IGSF21Q96ID5 467 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 TRIB3Q96RU7 358 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 RANBP3Q9H6Z4 567 aaPredicted RBP16.83■□□□□ 0.29
NPHP4-209ENST00000489180 H0YJX3 145 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 MAS1P04201 325 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 T-ENOLP0DO92 83 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 LAMP1P11279 417 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 HSD17B1P14061 328 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 SHMT2P34897 504 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 KCNC1P48547 511 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 FOXA1P55317 472 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 RPL19P84098 196 aaKnown RBP16.83■□□□□ 0.29
NPHP4-209ENST00000489180 PAGE3Q5JUK9 113 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 FIGNL1Q6PIW4 674 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 PLEKHG7Q6ZR37 379 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.83■□□□□ 0.29
NPHP4-209ENST00000489180 APIPQ96GX9 242 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 DHDHQ9UQ10 334 aa16.83■□□□□ 0.29
NPHP4-209ENST00000489180 A0A1B0GVC2 190 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms