RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SLC5A8Q8N695 610 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF321PQ8N8H1 164 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 OR8K3Q8NH51 312 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 TM9SF4Q92544 642 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 HAS2Q92819 552 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 PNPLA2Q96AD5 504 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 PPP3R2Q96LZ3 170 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 EPS8L2Q9H6S3 715 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 CXorf21Q9HAI6 301 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 GIMAP2Q9UG22 337 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 FREM3P0C091 2139 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 TRBV11-1A0A0K0K1C0 115 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 HRKO00198 91 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 CDK2AP1O14519 115 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 SUV39H1O43463 412 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 MLF1P58340 268 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 PPP2R2AP63151 447 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 HEPACAMQ14CZ8 416 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 MEP1AQ16819 746 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 PRSS53Q2L4Q9 553 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF750Q32MQ0 723 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 ACER2Q5QJU3 275 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 LINC00696Q6ZRV3 163 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 PTRH1Q86Y79 214 aaKnown RBP17.35■□□□□ 0.37
PTCD3-217ENST00000488801 TRIM42Q8IWZ5 723 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 PPWD1Q96BP3 646 aaKnown RBP17.35■□□□□ 0.37
PTCD3-217ENST00000488801 KLHL29Q96CT2 875 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 RBM18Q96H35 190 aaKnown RBP17.35■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF354BQ96LW1 612 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 MANSC1Q9H8J5 431 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 TAS2R7Q9NYW3 318 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 TEKT2Q9UIF3 430 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 NCKAP5O14513 1909 aa17.35■□□□□ 0.37
PTCD3-217ENST00000488801 TBX19O60806 448 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 WDPCPO95876 746 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 CT62P0C5K7 136 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 PORP16435 677 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-217ENST00000488801 CASRP41180 1078 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 XKP51811 444 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 MGAT2Q10469 447 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 FUT7Q11130 342 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 PDE7AQ13946 482 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 SMU1Q2TAY7 513 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 C6orf136Q5SQH8 315 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 ATG16L1Q676U5 607 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 FCRLBQ6BAA4 426 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 LRRC34Q8IZ02 419 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 BEST3Q8N1M1 668 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 ZADH2Q8N4Q0 377 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 GOLGA6L1Q8N7Z2 621 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 SUN3Q8TAQ9 357 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 CTHRC1Q96CG8 243 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 SENP5Q96HI0 755 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-217ENST00000488801 EGLN2Q96KS0 407 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 ART5Q96L15 291 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 OR8D2Q9GZM6 311 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 TRIM45Q9H8W5 580 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-217ENST00000488801 MEAF6Q9HAF1 191 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 PNPOQ9NVS9 261 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 ASIC5Q9NY37 505 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF639Q9UID6 485 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 UTS2RQ9UKP6 389 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 B3GNT3Q9Y2A9 372 aa17.34■□□□□ 0.37
PTCD3-217ENST00000488801 ATP6AP2A0A1C7CYW4 349 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 EIF4E1BA6NMX2 242 aaKnown RBP17.33■□□□□ 0.36
PTCD3-217ENST00000488801 ATP6AP2O75787 350 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 BCKDHAP12694 445 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 CSNK2A2P19784 350 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-217ENST00000488801 S1PR1P21453 382 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 ALDH9A1P49189 494 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 TNFSF10P50591 281 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 SLC37A1P57057 533 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 PDCD2Q16342 344 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-217ENST00000488801 PRICKLE4Q2TBC4 344 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 GALNTL6Q49A17 601 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 ATP6AP1LQ52LC2 224 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 ABHD17BQ5VST6 288 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 RPS19BP1Q86WX3 136 aaKnown RBP17.33■□□□□ 0.36
PTCD3-217ENST00000488801 GALNT12Q8IXK2 581 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 C9orf40Q8IXQ3 194 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF675Q8TD23 568 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 ZNF75CPQ92670 426 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-217ENST00000488801 RIT1Q92963 219 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 DEFB126Q9BYW3 111 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 SLC35C2Q9NQQ7 365 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 MAT2BQ9NZL9 334 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 HIVEP3Q5T1R4 2406 aa17.33■□□□□ 0.36
PTCD3-217ENST00000488801 GTF3C1Q12789 2109 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 OR5H15A6NDH6 313 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 A8MUI8 341 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 OR10H2O60403 315 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 ERAL1O75616 437 aaKnown RBP17.32■□□□□ 0.36
PTCD3-217ENST00000488801 TRHRP34981 398 aaPredicted RBP17.32■□□□□ 0.36
PTCD3-217ENST00000488801 ERVK-8P63133 956 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 RNF4P78317 190 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 C2orf80Q0P641 193 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 MAP4K2Q12851 820 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 FAM180BQ6P0A1 224 aa17.32■□□□□ 0.36
PTCD3-217ENST00000488801 SAMD14Q8IZD0 417 aaPredicted RBP17.32■□□□□ 0.36
PTCD3-217ENST00000488801 LRRC25Q8N386 305 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms