RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TCRBV16S1A1N1A0A5B0 115 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 A8MUA0 341 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 FGF17O60258 216 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 SLC22A3O75751 556 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 FURINP09958 794 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 SLC35E2P0CK97 266 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 ICAM2P13598 275 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 PORP16435 677 aaPredicted RBP9.64□□□□□ -0.87
SKA1-204ENST00000488454 NT5EP21589 574 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 ITPKBP27987 946 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 NTSP30990 170 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 FEN1P39748 380 aaKnown RBP9.64□□□□□ -0.87
SKA1-204ENST00000488454 STT3AP46977 705 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 CLNS1AP54105 237 aaKnown RBP9.64□□□□□ -0.87
SKA1-204ENST00000488454 RRADP55042 308 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 NME5P56597 212 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 PLIN5Q00G26 463 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 EEF1A2Q05639 463 aaKnown RBP9.64□□□□□ -0.87
SKA1-204ENST00000488454 PTGR1Q14914 329 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 PGS1Q32NB8 556 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 SFT2D3Q587I9 215 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 CPTPQ5TA50 214 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 C6orf163Q5TEZ5 329 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 TMEM198Q66K66 360 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 KIRREL2Q6UWL6 708 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 NDUFAF7Q7L592 441 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 SPATA21Q7Z572 469 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 PPP1R32Q7Z5V6 425 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 TMEM151BQ8IW70 566 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 ST13P4Q8IZP2 240 aaPredicted RBP9.64□□□□□ -0.87
SKA1-204ENST00000488454 MMP21Q8N119 569 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 MIER2Q8N344 545 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 DAZLQ92904 295 aaKnown RBP9.64□□□□□ -0.87
SKA1-204ENST00000488454 C8orf44Q96CB5 159 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 CATSPER2Q96P56 530 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 EPN3Q9H201 632 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 RABEP2Q9H5N1 569 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 KCNK13Q9HB14 408 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 ADAP2Q9NPF8 381 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 SLC35C2Q9NQQ7 365 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 MRGBPQ9NV56 204 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 P4HTMQ9NXG6 502 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 TAS2R7Q9NYW3 318 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 C5AR2Q9P296 337 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 ATP6V1HQ9UI12 483 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 CES1P1Q9UKY3 287 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 POLHQ9Y253 713 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 MAN2B2Q9Y2E5 1009 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 GPR45Q9Y5Y3 372 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 HS3ST3B1Q9Y662 390 aa9.64□□□□□ -0.87
SKA1-204ENST00000488454 LOC102723996A0A087X1L8 192 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 IGKV3D-11A0A0A0MRZ8 115 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 GABRR3A8MPY1 467 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 SOCS6O14544 535 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 SCAMP2O15127 329 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 HPP00738 406 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ALDOCP09972 364 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 CPMP14384 443 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 WT1P19544 449 aaPredicted RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 DRD4P21917 467 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 MANFP55145 182 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 AP2B1P63010 937 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 SRSF11Q05519 484 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 CDC20Q12834 499 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ATP1A4Q13733 1029 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ELAVL1Q15717 326 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 EXT1Q16394 746 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 DEFB109BQ30KR1 87 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 PDCD4Q53EL6 469 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 ANKRD26P1Q6NSI1 321 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 CGB2Q6NT52 195 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 PAPD4Q6PIY7 484 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 LANCL3Q6ZV70 420 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 MRGPREQ86SM8 312 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 LRRC25Q8N386 305 aaPredicted RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 KRTCAP2Q8N6L1 136 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 CLEC1AQ8NC01 280 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 GLB1L3Q8NCI6 653 aaPredicted RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 VPS37AQ8NEZ2 397 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 OR11G2Q8NGC1 345 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ADAMTS17Q8TE56 1095 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 RIT1Q92963 219 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 PPWD1Q96BP3 646 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 MARK4Q96L34 752 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 TUBB6Q9BUF5 446 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 BRINP2Q9C0B6 783 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ZNF700Q9H0M5 742 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ZIM2Q9NZV7 527 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 FBXL4Q9UKA2 621 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 ZMIZ1Q9ULJ6 1067 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 EXO1Q9UQ84 846 aaKnown RBP9.63□□□□□ -0.87
SKA1-204ENST00000488454 PKD1L2Q7Z442 2459 aa9.63□□□□□ -0.87
SKA1-204ENST00000488454 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
SKA1-204ENST00000488454 IGHV3-20A0A0C4DH32 117 aa9.62□□□□□ -0.87
SKA1-204ENST00000488454 A6NJY4 79 aa9.62□□□□□ -0.87
SKA1-204ENST00000488454 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms