RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ATP6V1C2Q8NEY4 427 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 DMBX1Q8NFW5 382 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR2T11Q8NH01 316 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 UBA3Q8TBC4 463 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CHURC1Q8WUH1 139 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC35F5Q8WV83 523 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 LPPQ93052 612 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TRMT2BQ96GJ1 504 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CELF6Q96J87 481 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TSGA13Q96PP4 275 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CPPED1Q9BRF8 314 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 DPH7Q9BTV6 452 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SARGQ9BW04 601 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 APOL5Q9BWW9 433 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 BCL2L14Q9BZR8 327 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SIK2Q9H0K1 926 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KCNH6Q9H252 994 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TFB2MQ9H5Q4 396 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SNTG1Q9NSN8 517 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MBNL3Q9NUK0 354 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KCTD5Q9NXV2 234 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF226Q9NYT6 803 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PDP1Q9P0J1 537 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RGS17Q9UGC6 210 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SCP2D1Q9UJQ7 156 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 POMT2Q9UKY4 750 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 OGDHLQ9ULD0 1010 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 AP1M2Q9Y6Q5 423 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PRAMEF33A0A0G2JMD5 474 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 A0A1B0GTL3 188 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 H7C2Y5 167 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KPNA3O00505 521 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SYN3O14994 580 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TGM5O43548 720 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 BRINP1O60477 761 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MPZL2O60487 215 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PSPNO60542 156 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PRAMEF10O60809 474 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KERAO60938 352 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAD17O75943 681 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SIX3O95343 332 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MLYCDO95822 493 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 S100A8P05109 93 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ICAM1P05362 532 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 FABP3P05413 133 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ADRA2AP08913 450 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF3P17036 446 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TPH1P17752 444 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TACR1P25103 407 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PSMA1P25786 263 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 AKT1P31749 480 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SDC2P34741 201 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TRHRP34981 398 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ADRA1AP35348 466 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RORAP35398 523 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CSKP41240 450 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 EFNA5P52803 228 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ATXN1P54253 815 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 AIF1P55008 147 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PSMD4P55036 377 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ABHD18Q0P651 414 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SCAPQ12770 1279 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MLLT11Q13015 90 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GPR17Q13304 367 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KCTD2Q14681 263 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SMAD2Q15796 467 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GOLGA7BQ2TAP0 167 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF528Q3MIS6 628 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 XKR3Q5GH77 459 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 C3orf38Q5JPI3 329 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 OTUD1Q5VV17 481 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 HACD4Q5VWC8 232 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SYPL2Q5VXT5 272 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 B3GNTL1Q67FW5 361 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ANKS6Q68DC2 871 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PLAG1Q6DJT9 500 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ELP2Q6IA86 826 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 APOBEC3HQ6NTF7 200 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ERICH5Q6P6B1 374 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 C5orf46Q6UWT4 87 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF730Q6ZMV8 503 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 C17orf107Q6ZR85 190 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CATSPERGQ6ZRH7 1159 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CHMP1BQ7LBR1 199 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ZNF605Q86T29 641 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SLC34A3Q8N130 599 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PYROXD2Q8N2H3 581 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 STPG2Q8N412 459 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 C12orf29Q8N999 325 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 AGBL3Q8NEM8 1001 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 B3GNT7Q8NFL0 401 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 OR1M1Q8NGA1 313 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMEM163Q8TC26 289 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GANCQ8TET4 914 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MASTLQ96GX5 879 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PRMT6Q96LA8 375 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PPP3R2Q96LZ3 170 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 C10orf90Q96M02 699 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TBATAQ96M53 351 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ERMAPQ96PL5 475 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms