RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 MMP21Q8N119 569 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 DNAJB8Q8NHS0 232 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 TMEM125Q96AQ2 219 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 CES1P1Q9UKY3 287 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 PSME2Q9UL46 239 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 ERVK-19Q9WJR5 959 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 DLGAP4Q9Y2H0 992 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 SHANK1Q9Y566 2161 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 AZIN1O14977 448 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 CTIFO43310 598 aaKnown RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 NME2P1O60361 137 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ERLIN1O75477 346 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ERAL1O75616 437 aaKnown RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ANXA4P09525 319 aaPredicted RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 EDN3P14138 238 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 CPMP14384 443 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 PORP16435 677 aaPredicted RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 NME2P22392 152 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 TIA1P31483 386 aaKnown RBP eCLIP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 PMP22Q01453 160 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 SRSF11Q05519 484 aaKnown RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ZNF750Q32MQ0 723 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ZNF324BQ6AW86 544 aaPredicted RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 GALNT18Q6P9A2 607 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 CROCCP2Q86T23 111 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 EXOC3L1Q86VI1 746 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 C9orf40Q8IXQ3 194 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 CYP4Z2PQ8N1L4 340 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ST6GALNAC3Q8NDV1 305 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 C16orf78Q8WTQ4 265 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ASB15Q8WXK1 588 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 NR4A3Q92570 626 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 RASL10BQ96S79 203 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 SLX1AQ9BQ83 275 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 CXorf21Q9HAI6 301 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 EML4Q9HC35 981 aaKnown RBP13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 SIRT5Q9NXA8 310 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 ERVK-11Q9UQG0 969 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
PFKFB3-213ENST00000487989 GOLGA6L10A6NI86 522 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 A8MVJ9 347 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 NPHS1O60500 1241 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 OR6B1O95007 311 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 BPGMP07738 259 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 IL3P08700 152 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 DRD2P14416 443 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 NT5EP21589 574 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 FEN1P39748 380 aaKnown RBP13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 SOX3P41225 446 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 SLC37A1P57057 533 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 UBAP2LQ14157 1087 aaKnown RBP13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 ARL13AQ5H913 290 aaPredicted RBP13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 FHL5Q5TD97 284 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 C6orf163Q5TEZ5 329 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 IL20RBQ6UXL0 311 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 ZCCHC23Q6ZST2 131 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 GALNT12Q8IXK2 581 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 GPALPP1Q8IXQ4 340 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 FAM98AQ8NCA5 519 aaKnown RBP13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 KLHL29Q96CT2 875 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 C11orf24Q96F05 449 aaPredicted RBP13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 HPF1Q9NWY4 346 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 HEY2Q9UBP5 337 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 ZNF780BQ9Y6R6 833 aa13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
PFKFB3-213ENST00000487989 CLEC18AA5D8T8 446 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 OR6C76A6NM76 312 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 SLC28A1O00337 649 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 RGS14O43566 566 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 SEC22BO75396 215 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 RSL1D1O76021 490 aaKnown RBP13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 CHEK2O96017 543 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 CHRNGP07510 517 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 FGF4P08620 206 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 CT62P0C5K7 136 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 MST1P26927 711 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 SSTR4P31391 388 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 ETV4P43268 484 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 SRSF1Q07955 248 aaKnown RBP eCLIP13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 MPEG1Q2M385 716 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 PIGGQ5H8A4 983 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 OPN5Q6U736 354 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 CLEC18BQ6UXF7 455 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 MDGA2Q7Z553 956 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 CLEC18CQ8NCF0 446 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 NUBPLQ8TB37 319 aa13.12□□□□□ -0.31
PFKFB3-213ENST00000487989 PGM2Q96G03 612 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms