RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 SERINC2Q96SA4 455 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
OPTN-212ENST00000487935 EHD1Q9H4M9 534 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 GSTO2Q9H4Y5 243 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 COPS7BQ9H9Q2 264 aaPredicted RBP11.33□□□□□ -0.6
OPTN-212ENST00000487935 MCCC2Q9HCC0 563 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 ZBTB26Q9HCK0 441 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 MED4Q9NPJ6 270 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 STK38LQ9Y2H1 464 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 CLDN16Q9Y5I7 305 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 HRH3Q9Y5N1 445 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 CLCA3PQ9Y6N3 262 aa11.33□□□□□ -0.6
OPTN-212ENST00000487935 TMEM200CA6NKL6 621 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 ACOT7O00154 380 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CTNSO60931 367 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 OR2J2O76002 312 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CLDN9O95484 217 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 DHRS4L1P0CG22 281 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 PCNAP12004 261 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CD22P20273 847 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CHRNB4P30926 498 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 SLC18A1P54219 525 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 MTTPP55157 894 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 LIM2P55344 173 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
OPTN-212ENST00000487935 NAA20P61599 178 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
OPTN-212ENST00000487935 PPP2R2AP63151 447 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 TGM3Q08188 693 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 LCP2Q13094 533 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CHI3L2Q15782 390 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 TBCCQ15814 346 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 HIST2H2ACQ16777 129 aaPredicted RBP11.32□□□□□ -0.6
OPTN-212ENST00000487935 HIST2H2AA3Q6FI13 130 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 HSDL2Q6YN16 418 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 C16orf47Q6ZP98 133 aaPredicted RBP11.32□□□□□ -0.6
OPTN-212ENST00000487935 FRMD7Q6ZUT3 714 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 GPRIN3Q6ZVF9 776 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 MILR1Q7Z6M3 343 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CLNKQ7Z7G1 428 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 CDH24Q86UP0 819 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 MARVELD2Q8N4S9 558 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 MORN4Q8NDC4 146 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 OR4F6Q8NGB9 312 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 RND1Q92730 232 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 UBE2E3Q969T4 207 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 WDR34Q96EX3 536 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 ZNF382Q96SR6 550 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 TREX2Q9BQ50 279 aaPredicted RBP11.32□□□□□ -0.6
OPTN-212ENST00000487935 DEFB127Q9H1M4 99 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 LIN28AQ9H9Z2 209 aaKnown RBP11.32□□□□□ -0.6
OPTN-212ENST00000487935 MID1IP1Q9NPA3 183 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 DEPPQ9NTK1 212 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 MYOTQ9UBF9 498 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 DAPP1Q9UN19 280 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 RNF6Q9Y252 685 aa11.32□□□□□ -0.6
OPTN-212ENST00000487935 WWP2O00308 870 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 CYR61O00622 381 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 PPP6CO00743 305 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 BIRC5O15392 142 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 UGDHO60701 494 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 CRCPO75575 148 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 OR6B1O95007 311 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 OR4F21O95013 312 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 TBX6O95947 436 aaPredicted RBP11.31□□□□□ -0.6
OPTN-212ENST00000487935 SERPINE1P05121 402 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 BGNP21810 368 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 CERS1P27544 350 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 PKNOX1P55347 436 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 STX4Q12846 297 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 DDX39BQ13838 428 aaKnown RBP11.31□□□□□ -0.6
OPTN-212ENST00000487935 CPSF6Q16630 551 aaKnown RBP eCLIP11.31□□□□□ -0.6
OPTN-212ENST00000487935 LIPJQ5W064 366 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 TTC19Q6DKK2 380 aaPredicted RBP11.31□□□□□ -0.6
OPTN-212ENST00000487935 LETMD1Q6P1Q0 360 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 ABHD17CQ6PCB6 329 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 RGS9BPQ6ZS82 235 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 VN1R5Q7Z5H4 357 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 OR2M7Q8NG81 312 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 OR14A16Q8NHC5 309 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 LILRB4Q8NHJ6 448 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 RASL10BQ96S79 203 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 CSF3RQ99062 836 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 ALOXE3Q9BYJ1 711 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 SHCBP1LQ9BZQ2 653 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 ROGDIQ9GZN7 287 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 KCNJ16Q9NPI9 418 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 VTI1BQ9UEU0 232 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 ZNF490Q9ULM2 529 aaPredicted RBP11.31□□□□□ -0.6
OPTN-212ENST00000487935 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
OPTN-212ENST00000487935 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
OPTN-212ENST00000487935 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
OPTN-212ENST00000487935 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
OPTN-212ENST00000487935 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
OPTN-212ENST00000487935 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
OPTN-212ENST00000487935 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms