RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ABRAXAS1Q6UWZ7 409 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 OLFM4Q6UX06 510 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ZNF841Q6ZN19 808 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 CARM1Q86X55 608 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 LRRC49Q8IUZ0 686 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ARL14Q8N4G2 192 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ZNF781Q8N8C0 355 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 C4orf32Q8N8J7 132 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 MLKLQ8NB16 471 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 OR4L1Q8NH43 312 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 RNASE8Q8TDE3 154 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 RAB39BQ96DA2 213 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 NSMCE2Q96MF7 247 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 TAAR6Q96RI8 345 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 C19orf43Q9BQ61 176 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 IL1RAPQ9NPH3 570 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ANO10Q9NW15 660 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 SENP1Q9P0U3 644 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 THAP10Q9P2Z0 257 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 HOOK1Q9UJC3 728 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 CCPG1Q9ULG6 757 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 DIMT1Q9UNQ2 313 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 NIP7Q9Y221 180 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ENTPD4Q9Y227 616 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 MRPL11Q9Y3B7 192 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 STRAPQ9Y3F4 350 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 CPQQ9Y646 472 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 SPATA31D1Q6ZQQ2 1576 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 A0A1W2PNU3 283 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FER1L5A0AVI2 2057 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 MACROD2A1Z1Q3 448 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 HTATSF1O43719 755 aaKnown RBP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 TSPAN2O60636 221 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 SH3BGRLO75368 114 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 SYNGR4O95473 234 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 TXNDC12O95881 172 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 HPP00738 406 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 IGHV3-13P01766 116 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 MT-ND1P03886 318 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FCER2P06734 321 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FCGR3AP08637 254 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 OR9G9P0C7N8 305 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 B4GALT1P15291 398 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FCARP24071 287 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 MATKP42679 507 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 PTGER3P43115 390 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 SRP54P61011 504 aaKnown RBP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 RPL27P61353 136 aaKnown RBP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 C17orf67Q0P5P2 114 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 RIGQ13278 110 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 EXOSC7Q15024 291 aaKnown RBP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 WSCD2Q2TBF2 565 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 POM121L1PQ3SYA9 428 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 VWA2Q5GFL6 755 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 DCAF12Q5T6F0 453 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 DLEU7Q6UYE1 221 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 TAF8Q7Z7C8 310 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC25A42Q86VD7 318 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 CNTN4Q8IWV2 1026 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 LINC00518Q8N0U6 118 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 ABHD12Q8N2K0 398 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 CHCHD4Q8N4Q1 142 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 NEK11Q8NG66 645 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 OR1K1Q8NGR3 316 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 URGCPQ8TCY9 931 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 DTD2Q96FN9 168 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 COG3Q96JB2 828 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 PRAM1Q96QH2 718 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 HSD17B14Q9BPX1 270 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 RAB11FIP5Q9BXF6 653 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FTHL17Q9BXU8 183 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 ATG10Q9H0Y0 220 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 LIME1Q9H400 295 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 HPS4Q9NQG7 708 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 ABCC13Q9NSE7 274 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 TECRQ9NZ01 308 aaKnown RBP3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 KCNN3Q9UGI6 736 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 FAM153AQ9UHL3 310 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 KLK13Q9UKR3 277 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 ATG4BQ9Y4P1 393 aa3.06□□□□□ -1.92
HMGB1P36-201ENST00000487709 RPGRIP1LQ68CZ1 1315 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 GLTPD2A6NH11 291 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 ACOD1A6NK06 481 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 TLR4O00206 839 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 BUB1O43683 1085 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 VEGFDO43915 354 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 NUDT14O95848 222 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 MT-ND3P03897 115 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 SNRPCP09234 159 aaKnown RBP3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 ACADSP16219 412 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 IL10P22301 178 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 TMOD1P28289 359 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 MAGEA4P43358 317 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 TNFRSF4P43489 277 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 PITPNBP48739 271 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 PGFP49763 221 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 CSRP3P50461 194 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 ATP4BP51164 291 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 CNN1P51911 297 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms