RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 RNF111Q6ZNA4 994 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 RAPH1Q70E73 1250 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 ZCCHC7Q8N3Z6 543 aaKnown RBP17.23■□□□□ 0.35
GMDS-205ENST00000486793 LIX1Q8N485 282 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 NAXEQ8NCW5 288 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 TNIP2Q8NFZ5 429 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 RIT1Q92963 219 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 MTERF1Q99551 399 aaKnown RBP17.23■□□□□ 0.35
GMDS-205ENST00000486793 DOHHQ9BU89 302 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 WWTR1Q9GZV5 400 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 NMRAL1Q9HBL8 299 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 PHF11Q9UIL8 331 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 ANKHD1Q8IWZ3 2542 aaKnown RBP17.23■□□□□ 0.35
GMDS-205ENST00000486793 ZNF469Q96JG9 3925 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 GLOD5A6NK44 160 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 KDM4EB2RXH2 506 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 SUPT3HB4E1H0 165 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 OR10H2O60403 315 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 TRIM3O75382 744 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 SUPT3HO75486 399 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 FAM155BO75949 473 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 EPPINO95925 133 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 SLC35E2BP0CK96 405 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 EPB42P16452 691 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 CEACAM8P31997 349 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 SPRP35270 261 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 PIK3CBP42338 1070 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 WNT3P56703 355 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 SLC37A1P57057 533 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 GNG11P61952 73 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 DUSP8Q13202 625 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 EBPQ15125 230 aaKnown RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 NTRK2Q16620 822 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 GRTP1Q5TC63 336 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 GRHL2Q6ISB3 625 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 CMC1Q7Z7K0 106 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 CDC20BQ86Y33 519 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 MYLK4Q86YV6 388 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 CTAGE3PQ8IX95 158 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 TEX9Q8N6V9 391 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 RELL2Q8NC24 303 aaPredicted RBP17.22■□□□□ 0.35
GMDS-205ENST00000486793 UBTD2Q8WUN7 234 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 UCN3Q969E3 161 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 ATOH8Q96SQ7 321 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 TIMP4Q99727 224 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 CENPKQ9BS16 269 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 DMRT3Q9NQL9 472 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 PLEKHA6Q9Y2H5 1048 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 ASB4Q9Y574 426 aa17.22■□□□□ 0.35
GMDS-205ENST00000486793 C15orf38-AP3S2A0A0A6YYH1 394 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 A0A1W2PR48 441 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 ANKRD33BA6NCL7 494 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 A6NNC1 897 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 AHRRA9YTQ3 701 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 DVL2O14641 736 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 KERAO60938 352 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 EEDO75530 441 aaKnown RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 ACSL3O95573 720 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 CLPSP04118 112 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 PTX3P26022 381 aaPredicted RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 GDF1P27539 372 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 PEX19P40855 299 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 BUD31P41223 144 aaPredicted RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 PAFAH1B1P43034 410 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 GPX6P59796 221 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 RPS13P62277 151 aaKnown RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 PPP2R2AP63151 447 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 SPRED3Q2MJR0 410 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 ACSF3Q4G176 576 aaPredicted RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 TMEM198Q66K66 360 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 MRM1Q6IN84 353 aaKnown RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 POMZP3Q6PJE2 187 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 TAGAPQ8N103 731 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 GOT1L1Q8NHS2 421 aaPredicted RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 DIO2Q92813 273 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 RNASE6Q93091 150 aaKnown RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 RMND5BQ96G75 393 aaPredicted RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 SH3GL2Q99962 352 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 PELOQ9BRX2 385 aaKnown RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 ZNF717Q9BY31 904 aaPredicted RBP17.21■□□□□ 0.35
GMDS-205ENST00000486793 DPH5Q9H2P9 285 aa17.21■□□□□ 0.35
GMDS-205ENST00000486793 ABCA4P78363 2273 aa17.21■□□□□ 0.34
GMDS-205ENST00000486793 C2orf92A0A1B0GVN3 265 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 OR6C76A6NM76 312 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 EIF3HO15372 352 aaKnown RBP eCLIP17.2■□□□□ 0.34
GMDS-205ENST00000486793 TMPRSS11DO60235 418 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 TRAPPC6AO75865 159 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 FAM58BPP0C7Q3 252 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 SLC35E2P0CK97 266 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 MTHFD2P13995 350 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 HOXB4P17483 251 aaPredicted RBP17.2■□□□□ 0.34
GMDS-205ENST00000486793 DNASE1P24855 282 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 CRABP2P29373 138 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 BSGP35613 385 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 ASCL1P50553 236 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 FLYWCH1Q4VC44 716 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 BICRALQ6AI39 1079 aa17.2■□□□□ 0.34
GMDS-205ENST00000486793 TBC1D1Q86TI0 1168 aaPredicted RBP17.2■□□□□ 0.34
GMDS-205ENST00000486793 PPM1NQ8N819 430 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms