RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 KLF7O75840 302 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 MYO1DO94832 1006 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 UBOX5O94941 541 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 LCA5LO95447 670 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CSTAP01040 98 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 FTLP02792 175 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 HLA-DQB2P05538 268 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 FHP07954 510 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ZGLP1P0C6A0 271 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PRR23D2P0DMB1 279 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ETS1P14921 441 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 EZRP15311 586 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PRKCAP17252 672 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CTRB1P17538 263 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 POLR2CP19387 275 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 SAT1P21673 171 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 KPNA2P52292 529 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ATP5IP56385 69 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 RPP30P78346 268 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PMP22Q01453 160 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 LIPEQ05469 1076 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ABRQ12979 859 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CALCOCO2Q13137 446 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 AIMP2Q13155 320 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF169Q14929 603 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PAFAH1B3Q15102 231 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 GPR68Q15743 365 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 KHDC1Q4VXA5 237 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 FAM98BQ52LJ0 330 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF628Q5EBL2 1059 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 C9orf152Q5JTZ5 239 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 LDLRAP1Q5SW96 308 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 BEND6Q5SZJ8 279 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 AGAP7PQ5VUJ5 663 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ZDHHC20Q5W0Z9 365 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 METRNLQ641Q3 311 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CTRB2Q6GPI1 263 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 GALNT18Q6P9A2 607 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM220Q6QAJ8 160 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 KLHL17Q6TDP4 642 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF813Q6ZN06 617 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 REXO1L1PQ8IX06 675 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 BCORP1Q8N888 145 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CCNYQ8ND76 341 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 OR2Y1Q8NGV0 311 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 AKR7LQ8NHP1 331 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 TEX47Q8TBZ9 253 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 POC1BQ8TC44 478 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 STYXQ8WUJ0 223 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 EID2BQ96D98 161 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 C12orf66Q96MD2 445 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 TSNARE1Q96NA8 513 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 AGAP4Q96P64 663 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 NR1H4Q96RI1 486 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 DIRC2Q96SL1 478 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 KLHL4Q9C0H6 718 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PITHD1Q9GZP4 211 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 NAT10Q9H0A0 1025 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 MUC13Q9H3R2 512 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 KIR3DX1Q9H7L2 352 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 IL26Q9NPH9 171 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 SMPD3Q9NY59 655 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 MARCH4Q9P2E8 410 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 MYO1AQ9UBC5 1043 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 SLC24A2Q9UI40 661 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 POMT2Q9UKY4 750 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ACSL5Q9ULC5 683 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 MRPS2Q9Y399 296 aaKnown RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PCDHA9Q9Y5H5 950 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 HEBP2Q9Y5Z4 205 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PCM1Q15154 2024 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CSMD1Q96PZ7 3565 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ADGRG4Q8IZF6 3080 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 URADA6NGE7 173 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 CCDC154A6NI56 674 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 AHRRA9YTQ3 701 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 AGPSO00116 658 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 MFSD11O43934 449 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 NPHS1O60500 1241 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 CRCPO75575 148 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 RHBDL1O75783 438 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 TNFRSF6BO95407 300 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 TSPAN15O95858 294 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 LIPFP07098 398 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 MMP2P08253 660 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ITGA5P08648 1049 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SLC35G4P0C7Q5 338 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 PIRTP0C851 137 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 HTR1EP28566 365 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SSTR2P30874 369 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 PAFAH1B1P43034 410 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 RPS3AP61247 264 aaKnown RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 STX1BP61266 288 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 EEF1A1P68104 462 aaKnown RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 RNF4P78317 190 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 DCDP81605 110 aaKnown RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 EEF1A2Q05639 463 aaKnown RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 TSTA3Q13630 321 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF630Q2M218 657 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms