RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GALNT12Q8IXK2 581 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 KBTBD2Q8IY47 623 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 RFWD2Q8NHY2 731 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.65□□□□□ -0.7
NUP50-216ENST00000486184 SNRNP27Q8WVK2 155 aaKnown RBP10.65□□□□□ -0.7
NUP50-216ENST00000486184 RIT1Q92963 219 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 PPWD1Q96BP3 646 aaKnown RBP10.65□□□□□ -0.7
NUP50-216ENST00000486184 MARK4Q96L34 752 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 MESP1Q9BRJ9 268 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 CNPPD1Q9BV87 410 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 TMEM120AQ9BXJ8 343 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 OR8D2Q9GZM6 311 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 FAM107BQ9H098 131 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 KLHL14Q9P2G3 628 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 CES1P1Q9UKY3 287 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 KCNMB2Q9Y691 235 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 PCSK5Q92824 1860 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 TPRP12270 2363 aaKnown RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 GMNCA6NCL1 334 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 TBX19O60806 448 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 SERPINA7P05543 415 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 ALDOCP09972 364 aaKnown RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 NCF2P19878 526 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 GALNSP34059 522 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 GPC1P35052 558 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 CCL11P51671 97 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 NCBP2P52298 156 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUP50-216ENST00000486184 SLC26A5P58743 744 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 IRX1P78414 480 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 SF3A3Q12874 501 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUP50-216ENST00000486184 ZNF267Q14586 743 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 DPY19L1Q2PZI1 675 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 PGS1Q32NB8 556 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 TMEM198Q66K66 360 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 CPZQ66K79 652 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 PLAG1Q6DJT9 500 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 ANKRD26P1Q6NSI1 321 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 FAM180BQ6P0A1 224 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 APLFQ8IW19 511 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 MIER2Q8N344 545 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 GALNT16Q8N428 558 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 KRTCAP2Q8N6L1 136 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 NATD1Q8N6N6 113 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 MORN4Q8NDC4 146 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 B3GNT7Q8NFL0 401 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 M1APQ8TC57 530 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 STON2Q8WXE9 905 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 CNRIP1Q96F85 164 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 VMP1Q96GC9 406 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 ZNF764Q96H86 408 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 THOC3Q96J01 351 aaKnown RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 ZNF317Q96PQ6 595 aaPredicted RBP10.64□□□□□ -0.71
NUP50-216ENST00000486184 KCNK13Q9HB14 408 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUP50-216ENST00000486184 TAS2R7Q9NYW3 318 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 ATP6V1HQ9UI12 483 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 DOCK10Q96BY6 2186 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 PTPRQQ9UMZ3 2332 aa10.64□□□□□ -0.71
NUP50-216ENST00000486184 A6NL46 340 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 GABRR3A8MPY1 467 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 SLC22A3O75751 556 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 SLITRK5O94991 958 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 ATP1B1P05026 303 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 CLCN2P51788 898 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 SEC24CP53992 1094 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 MANFP55145 182 aaKnown RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 RHDQ02161 417 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 SRSF11Q05519 484 aaKnown RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 PDE7AQ13946 482 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 TBR1Q16650 682 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 SPRED3Q2MJR0 410 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 ZNF750Q32MQ0 723 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 PDCD4Q53EL6 469 aaKnown RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 JMJD6Q6NYC1 403 aaPredicted RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 CCDC116Q8IYX3 515 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 GLB1L3Q8NCI6 653 aaPredicted RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 VPS37AQ8NEZ2 397 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 OR7A2PQ8NGA2 310 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 SLC2A12Q8TD20 617 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 PTPMT1Q8WUK0 201 aaPredicted RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 EXTL1Q92935 676 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 NCLNQ969V3 563 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 CRELD1Q96HD1 420 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 IMMP1LQ96LU5 166 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 WDR77Q9BQA1 342 aaPredicted RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 DUSP26Q9BV47 211 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 DEFB126Q9BYW3 111 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 LHPPQ9H008 270 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 RABEP2Q9H5N1 569 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 PRORYQ9H606 182 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 MRGBPQ9NV56 204 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 FAM53CQ9NYF3 392 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 EXO1Q9UQ84 846 aaKnown RBP10.63□□□□□ -0.71
NUP50-216ENST00000486184 ERVK-19Q9WJR5 959 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 CLDN16Q9Y5I7 305 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 GPR45Q9Y5Y3 372 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 CPAMD8Q8IZJ3 1885 aa10.63□□□□□ -0.71
NUP50-216ENST00000486184 MED13Q9UHV7 2174 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms