RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MMADHCQ9H3L0 296 aaPredicted RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 PIF1Q9H611 641 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 KAT8Q9H7Z6 458 aaKnown RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 TPT1P8Q9HAU6 139 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 NEUROD4Q9HD90 331 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 NECTIN3Q9NQS3 549 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 ZNF282Q9UDV7 671 aaPredicted RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 PISDQ9UG56 409 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 SNX8Q9Y5X2 465 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 ZNF780BQ9Y6R6 833 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 CNOT1A5YKK6 2376 aaKnown RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 SDK2Q58EX2 2172 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 IGLV3-12A0A075B6K2 115 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 FAM149AA5PLN7 773 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CLIC1O00299 241 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CPNE3O75131 537 aaKnown RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CT62P0C5K7 136 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SOAT1P35610 550 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 MC3RP41968 323 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 GSK3BP49841 420 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 MAPK10P53779 464 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 MS4A2Q01362 244 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 LIPEQ05469 1076 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 LRRC74AQ0VAA2 488 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SLC13A2Q13183 592 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 NKAIN1Q4KMZ8 207 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 COX20Q5RI15 118 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 FAM111BQ6SJ93 734 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 MED25Q71SY5 747 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 BPHLQ86WA6 291 aaPredicted RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ZNF595Q8IYB9 648 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 NATD1Q8N6N6 113 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ADAMTS18Q8TE60 1221 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 KAT2AQ92830 837 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 TSLPQ969D9 159 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 PPWD1Q96BP3 646 aaKnown RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 FAM120BQ96EK7 910 aaKnown RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ZNF583Q96ND8 569 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 DEPDC7Q96QD5 511 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 OR1F2PQ96R84 312 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 YIPF2Q9BWQ6 316 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SLC7A5P2Q9GIP4 190 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 PCDHAC1Q9H158 963 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SERHL2Q9H4I8 314 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 PRTFDC1Q9NRG1 225 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CDC14AQ9UNH5 594 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 GMEB1Q9Y692 573 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CELSR3Q9NYQ7 3312 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 IGKV3D-11A0A0A0MRZ8 115 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 C15orf38-AP3S2A0A0A6YYH1 394 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 RNF103-CHMP3A0A140T963 221 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 C9orf172C9J069 976 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 MEN1O00255 615 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 NVLO15381 856 aaKnown RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 GFRA3O60609 400 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CTNSO60931 367 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ONECUT2O95948 504 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 RECKO95980 971 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ATP1B1P05026 303 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 NUDT7P0C024 238 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SOX11P35716 441 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 OR4D2P58180 307 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 RPS26P62854 115 aaKnown RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 RHAGQ02094 409 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ABHD18Q0P651 414 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 MGAT2Q10469 447 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ZNF628Q5EBL2 1059 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 C3orf38Q5JPI3 329 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 FAM199XQ6PEV8 388 aaPredicted RBP13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SHISA6Q6ZSJ9 500 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ARPINQ7Z6K5 226 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CALHM3Q86XJ0 350 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 PRSS58Q8IYP2 241 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 OR7G2Q8NG99 324 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 OR10A6Q8NH74 314 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ULBP3Q9BZM4 244 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 ALG2Q9H553 416 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 FOXJ2Q9P0K8 574 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 PSME2Q9UL46 239 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 SATB2Q9UPW6 733 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 POMPQ9Y244 141 aa13.63□□□□□ -0.23
LRIF1-202ENST00000485275 CCDC187A0A096LP49 1063 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 PLD2O14939 933 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 DNAJA2O60884 412 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 HSD17B1P14061 328 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 PORP16435 677 aaPredicted RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 MPIP34949 423 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 ERFP50548 548 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 NOVA1P51513 510 aaKnown RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 HSD17B7P56937 341 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 DCDP81605 110 aaKnown RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 TARDBPQ13148 414 aaKnown RBP eCLIP13.62□□□□□ -0.232e-7■■■■□ 20.1
LRIF1-202ENST00000485275 PRICKLE4Q2TBC4 344 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 SAMD4BQ5PRF9 694 aaKnown RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 FAM69BQ5VUD6 431 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 SAXO2Q658L1 398 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 ZNF517Q6ZMY9 492 aaPredicted RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 IFNEQ86WN2 208 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms