RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PRR5P85299 388 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 KANSL1Q7Z3B3 1105 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 CCDC116Q8IYX3 515 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 TBC1D20Q96BZ9 403 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 RBM38Q9H0Z9 239 aaKnown RBP24.72■■□□□ 1.55
SHOX2-204ENST00000483851 C3orf14Q9HBI5 128 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 SUV39H1O43463 412 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 OR6B1O95007 311 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 FHP07954 510 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 ALPPL2P10696 532 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 PNLIPP16233 465 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 MLLT3P42568 568 aaPredicted RBP24.72■■□□□ 1.55
SHOX2-204ENST00000483851 FAM53BQ14153 422 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 NADK2Q4G0N4 442 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 PATL1Q86TB9 770 aaKnown RBP24.72■■□□□ 1.55
SHOX2-204ENST00000483851 LRRC25Q8N386 305 aaPredicted RBP24.72■■□□□ 1.55
SHOX2-204ENST00000483851 GALNT15Q8N3T1 639 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 NECAB3Q96P71 396 aaPredicted RBP24.72■■□□□ 1.55
SHOX2-204ENST00000483851 ZCCHC3Q9NUD5 404 aaKnown RBP24.72■■□□□ 1.55
SHOX2-204ENST00000483851 SEMA5BQ9P283 1151 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 SCN3AQ9NY46 2000 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 EI24O14681 340 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 HCRTR1O43613 425 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 B4GALT2O60909 372 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 CST1P01037 141 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 C9P02748 559 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 GSTT1P30711 240 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 PPM1FP49593 454 aaPredicted RBP24.71■■□□□ 1.55
SHOX2-204ENST00000483851 GFERP55789 205 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 PCBP3P57721 371 aaKnown RBP24.71■■□□□ 1.55
SHOX2-204ENST00000483851 MYBPC3Q14896 1274 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 REEP3Q6NUK4 255 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 PIWIL3Q7Z3Z3 882 aaKnown RBP24.71■■□□□ 1.55
SHOX2-204ENST00000483851 HORMAD2Q8N7B1 307 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 DTWD2Q8NBA8 298 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 NFKBIDQ8NI38 313 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 CEP76Q8TAP6 659 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 MIPOL1Q8TD10 442 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 TANKQ92844 425 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 SLC35G5Q96KT7 338 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 MYRFQ9Y2G1 1151 aa24.71■■□□□ 1.55
SHOX2-204ENST00000483851 EMC8O43402 210 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 GCM2O75603 506 aaPredicted RBP24.7■■□□□ 1.55
SHOX2-204ENST00000483851 MT-ND1P03886 318 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 IFI6P09912 130 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 FEN1P39748 380 aaKnown RBP24.7■■□□□ 1.55
SHOX2-204ENST00000483851 NR1H2P55055 460 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 SELENOWP63302 87 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 TP53BP2Q13625 1128 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 CYBRD1Q53TN4 286 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 CA13Q8N1Q1 262 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 SVOPLQ8N434 492 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 ZFAND2BQ8WV99 257 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 PIGKQ92643 395 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 DGCR14Q96DF8 476 aaKnown RBP24.7■■□□□ 1.55
SHOX2-204ENST00000483851 VPS50Q96JG6 964 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 DOHHQ9BU89 302 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 PAPOLBQ9NRJ5 636 aaKnown RBP24.7■■□□□ 1.55
SHOX2-204ENST00000483851 NTMQ9P121 344 aa24.7■■□□□ 1.55
SHOX2-204ENST00000483851 BLACEA4D250 179 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 TMEM247A6NEH6 219 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 TRIM64A6NGJ6 449 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 ENO4A6NNW6 628 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 CYR61O00622 381 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 SLITRK5O94991 958 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 GNAO1P09471 354 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 RAB38P57729 211 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 DEFB110Q30KQ9 67 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 INAVAQ3KP66 663 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 KRT80Q6KB66 452 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 ZDHHC21Q8IVQ6 265 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 ZC3H7AQ8IWR0 971 aaKnown RBP24.7■■□□□ 1.54
SHOX2-204ENST00000483851 TSPAN14Q8NG11 270 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 ADAMTS18Q8TE60 1221 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 LZICQ8WZA0 190 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 ELP4Q96EB1 424 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 HSH2DQ96JZ2 352 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 SOHLH2Q9NX45 425 aa24.7■■□□□ 1.54
SHOX2-204ENST00000483851 MN1Q10571 1320 aaPredicted RBP24.69■■□□□ 1.54
SHOX2-204ENST00000483851 IGHV5-51A0A0C4DH38 117 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 DPM1O60762 260 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 ATP6V1B1P15313 513 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 XKP51811 444 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 CRYBA2P53672 197 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 OR1D5P58170 312 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 WDR74Q6RFH5 385 aaPredicted RBP24.69■■□□□ 1.54
SHOX2-204ENST00000483851 TBPL2Q6SJ96 375 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 TMEM105Q8N8V8 129 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 SAP25Q8TEE9 199 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 CSF3RQ99062 836 aa24.69■■□□□ 1.54
SHOX2-204ENST00000483851 TMEM121BQ9BXQ6 578 aaPredicted RBP24.69■■□□□ 1.54
SHOX2-204ENST00000483851 FITM1A5D6W6 292 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 TRIM64CA6NLI5 447 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 HMGN4O00479 90 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 TFPTP0C1Z6 253 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 C8orf89P0DMQ9 161 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 ZNF23P17027 643 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 KHKP50053 298 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 CASP9P55211 416 aa24.68■■□□□ 1.54
SHOX2-204ENST00000483851 DUSP2Q05923 314 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms