RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 G6PC3Q9BUM1 346 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 SFXN3Q9BWM7 321 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 WWTR1Q9GZV5 400 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 LYRM4Q9HD34 91 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 ZNF490Q9ULM2 529 aaPredicted RBP9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 IKBKGQ9Y6K9 419 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 ROS1P08922 2347 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 USF3Q68DE3 2245 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ANKDD1BA6NHY2 528 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 RCBTB2O95199 551 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 KRT14P02533 472 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 CLPSP04118 112 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 CYP4B1P13584 511 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 COX7A2P14406 83 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ATP5A1P25705 553 aaKnown RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 LOXP28300 417 aaPredicted RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 SLC6A12P48065 614 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 MASP1P48740 699 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 HERVK_113P63132 956 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ERVK-8P63133 956 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 CRYMQ14894 314 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 EBPQ15125 230 aaKnown RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 TBCELQ5QJ74 424 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 YRDCQ86U90 279 aaKnown RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 DND1Q8IYX4 353 aaKnown RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ZNF441Q8N8Z8 693 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 GPATCH11Q8N954 259 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ACOT4Q8N9L9 421 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 FAM83FQ8NEG4 500 aaPredicted RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 IGFBPL1Q8WX77 278 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 NTNG2Q96CW9 530 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 PDLIM5Q96HC4 596 aaKnown RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 MARK4Q96L34 752 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ERVK-6Q9BXR3 956 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ANGPTL4Q9BY76 406 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 NT5DC2Q9H857 520 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 TEX10Q9NXF1 929 aaPredicted RBP9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ERVK-19Q9WJR5 959 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 ZKSCAN5Q9Y2L8 839 aa9.9□□□□□ -0.82
SMARCC1-205ENST00000483847 EXPH5Q8NEV8 1989 aa9.9□□□□□ -0.83
SMARCC1-205ENST00000483847 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 WASHC1A8K0Z3 465 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 GNB5O14775 395 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 SH3BGRLO75368 114 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 BANF1O75531 89 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 PRKRAO75569 313 aaKnown RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 TNFSF13O75888 250 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CPN1P15169 458 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CD22P20273 847 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CPN2P22792 545 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CRYGSP22914 178 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 GSTM2P28161 218 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 PTPN6P29350 595 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CCKARP32238 428 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 MC3RP41968 323 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 RPL21P46778 160 aaKnown RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 KCNC1P48547 511 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 SLC37A1P57057 533 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 SRYQ05066 204 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 DMTNQ08495 405 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 TNK1Q13470 666 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 ZNF267Q14586 743 aaPredicted RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 ZNF460Q14592 562 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 RPS6KA2Q15349 733 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 FBXO48Q5FWF7 155 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 RNF111Q6ZNA4 994 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 C20orf204Q6ZNR8 217 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 C22orf34Q6ZV56 151 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 SLC29A4Q7RTT9 530 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 ADGRE4PQ86SQ3 457 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CNTN4Q8IWV2 1026 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 KRT78Q8N1N4 520 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 RNF10Q8N5U6 811 aaKnown RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 BBOF1Q8ND07 529 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 SPPL2AQ8TCT8 520 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 RBM18Q96H35 190 aaKnown RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 KCNC2Q96PR1 638 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 TM9SF2Q99805 663 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 BAG1Q99933 345 aaPredicted RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 SORBS1Q9BX66 1292 aaKnown RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 PIGMQ9H3S5 423 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 RYDENQ9NUL5 291 aaKnown RBP9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 CLCF1Q9UBD9 225 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 PACSIN3Q9UKS6 424 aa9.89□□□□□ -0.83
SMARCC1-205ENST00000483847 A0A087X1B8 175 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 IQANK1A0A1B0GTG1 560 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 NCF1BA6NI72 391 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 NCF1CA8MVU1 366 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 H0Y3Z8 333 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 TP53I11O14683 189 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 TAPBPO15533 448 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 SOX30O94993 753 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 SNX4O95219 450 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 ACTL6AO96019 429 aa9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 NCF1P14598 390 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 ZNF37AP17032 561 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-205ENST00000483847 PGAM1P18669 254 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms