RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 DCST1Q5T197 706 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 OR4C11Q6IEV9 310 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 RNF111Q6ZNA4 994 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 GPR180Q86V85 440 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 CTAGE3PQ8IX95 158 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 LAS2Q8IYD9 372 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 PRR22Q8IZ63 422 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 LRRC25Q8N386 305 aaPredicted RBP12.77□□□□□ -0.37
VARS-226ENST00000483275 HUS1BQ8NHY5 278 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 UBXN10Q96LJ8 280 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 TXNDC16Q9P2K2 825 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 OPTCQ9UBM4 332 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 SLC6A5Q9Y345 797 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.77□□□□□ -0.37
VARS-226ENST00000483275 SYNDIG1LA6NDD5 238 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 A6NNC1 897 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 OR10H2O60403 315 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 C1QAP02745 245 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 SLC35E2BP0CK96 405 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 GABRA1P14867 456 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 CASP2P42575 452 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 PIK3CGP48736 1102 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 SLC37A1P57057 533 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 RAB10P61026 200 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 RPS13P62277 151 aaKnown RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 IRF9Q00978 393 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 CRYZQ08257 329 aaKnown RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 DUSP8Q13202 625 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 FLYWCH1Q4VC44 716 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 CDKL4Q5MAI5 379 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 FAM219BQ5XKK7 198 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 GRHL2Q6ISB3 625 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 PLXDC2Q6UX71 529 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 CHSY3Q70JA7 882 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 SLC29A4Q7RTT9 530 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 TEX9Q8N6V9 391 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 CHDHQ8NE62 594 aaPredicted RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 SRFBP1Q8NEF9 429 aaKnown RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 DIO2Q92813 273 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 RBM18Q96H35 190 aaKnown RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 ZNF597Q96LX8 424 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 ATOH8Q96SQ7 321 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 ZNF717Q9BY31 904 aaPredicted RBP12.76□□□□□ -0.37
VARS-226ENST00000483275 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 NUDT4Q9NZJ9 180 aa12.76□□□□□ -0.37
VARS-226ENST00000483275 IQANK1A0A1B0GTG1 560 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 A0A1W2PR48 441 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 FAM159BA6NKW6 160 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 K7EPI3 171 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 DYRK3O43781 588 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 TRAPPC6AO75865 159 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ACSL3O95573 720 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 AIFM1O95831 613 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 NR2F6P10588 404 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 DNASE1P24855 282 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 GP5P40197 560 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 PAFAH1B1P43034 410 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ASCL1P50553 236 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ZNF136P52737 540 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 DGKQP52824 942 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 GPX6P59796 221 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 E2F2Q14209 437 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 NNATQ16517 81 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 DEPDC1Q5TB30 811 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 POMZP3Q6PJE2 187 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 RAPH1Q70E73 1250 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ISCA2Q86U28 154 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 PPM1NQ8N819 430 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 UBTD2Q8WUN7 234 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 KCTD4Q8WVF5 259 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 RIT1Q92963 219 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 NINJ1Q92982 152 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 RGMAQ96B86 450 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ART5Q96L15 291 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 RILPQ96NA2 401 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 CPNE1Q99829 537 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 SMR3AQ99954 134 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ABCA2Q9BZC7 2435 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 B4GALT7Q9UBV7 327 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 CAMK2AQ9UQM7 478 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 SAR1BQ9Y6B6 198 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 ZANQ9Y493 2812 aa12.75□□□□□ -0.37
VARS-226ENST00000483275 MED12LQ86YW9 2145 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 A0A0A6YYD5 115 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 HSPB2A8KAH6 182 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 EEF1E1-BLOC1S5C9J1V9 151 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 SYT5O00445 386 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 DVL2O14641 736 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 PGRMC2O15173 223 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 EEF1E1O43324 174 aaKnown RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 TRIM3O75382 744 aaPredicted RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 GPR75O95800 540 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 CT62P0C5K7 136 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 SERPINB3P29508 390 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 NEK2P51955 445 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 POU4F3Q15319 338 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms