RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 NAXDQ8IW45 347 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 SLC22A18ASQ8N1D0 253 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 OR6M1Q8NGM8 313 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 OR4L1Q8NH43 312 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 GLYATL1Q969I3 302 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 SERAC1Q96JX3 654 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 CXorf58Q96LI9 332 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 SLITRK2Q9H156 845 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 IL1RL2Q9HB29 575 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 SLC25A19Q9HC21 320 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 IL1RAPL2Q9NP60 686 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 ABCC13Q9NSE7 274 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 TAS2R16Q9NYV7 291 aa3.84□□□□□ -1.79
CALD1-219ENST00000480638 MRTO4Q9UKD2 239 aaKnown RBP3.84□□□□□ -1.79
CALD1-219ENST00000480638 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 SMIM30A4D0T7 59 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 ZSCAN5CA6NGD5 496 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 MEI4A8MW99 385 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 CACNB4O00305 520 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 TXNDC12O95881 172 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 UMPSP11172 480 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 HSD17B1P14061 328 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 CYP3A5P20815 502 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 CALML3P27482 149 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 ATP5DP30049 168 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 PPP2R1BP30154 601 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 TKTL1P51854 596 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 HMGCS2P54868 508 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 LTB4RQ15722 352 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 IFI44LQ53G44 452 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 PRR30Q53SZ7 412 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 SIDT2Q8NBJ9 832 aaKnown RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 ZBED6CLQ96FA7 236 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 TTYH2Q9BSA4 534 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 ST6GALNAC5Q9BVH7 336 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 OSBPL8Q9BZF1 889 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 MMADHCQ9H3L0 296 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 RCOR3Q9P2K3 495 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 TRPC4Q9UBN4 977 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 RNF24Q9Y225 148 aa3.83□□□□□ -1.8
CALD1-219ENST00000480638 FOXA2Q9Y261 457 aaPredicted RBP3.83□□□□□ -1.8
CALD1-219ENST00000480638 FGD5Q6ZNL6 1462 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 TSPAN2O60636 221 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 RHBDL1O75783 438 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 DUX4L4P0CJ87 422 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 CTNNB1P35222 781 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 ODF2Q5BJF6 829 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 PRSS42Q7Z5A4 293 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 ANKRD23Q86SG2 305 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 STHQ8IWL8 128 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 NAT8LQ8N9F0 302 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 RELL2Q8NC24 303 aaPredicted RBP3.82□□□□□ -1.8
CALD1-219ENST00000480638 FBXO25Q8TCJ0 367 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 TBCKQ8TEA7 893 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 BCL2L2Q92843 193 aaPredicted RBP3.82□□□□□ -1.8
CALD1-219ENST00000480638 CNOT6LQ96LI5 555 aaKnown RBP3.82□□□□□ -1.8
CALD1-219ENST00000480638 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
CALD1-219ENST00000480638 DESI2Q9BSY9 194 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 TSPYL1Q9H0U9 437 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 C2orf40Q9H1Z8 148 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 SLC26A1Q9H2B4 701 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 AKIRIN1Q9H9L7 192 aaPredicted RBP3.82□□□□□ -1.8
CALD1-219ENST00000480638 Q9HAA7 133 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 ELL3Q9HB65 397 aaPredicted RBP3.82□□□□□ -1.8
CALD1-219ENST00000480638 B4GALT7Q9UBV7 327 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 MLXQ9UH92 298 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 RSPH14Q9UHP6 348 aa3.82□□□□□ -1.8
CALD1-219ENST00000480638 MMP10P09238 476 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 GIG44P09565 113 aaPredicted RBP3.81□□□□□ -1.8
CALD1-219ENST00000480638 P4HA1P13674 534 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 STIP1P31948 543 aaKnown RBP3.81□□□□□ -1.8
CALD1-219ENST00000480638 HMGCLP35914 325 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 GK2Q14410 553 aaPredicted RBP3.81□□□□□ -1.8
CALD1-219ENST00000480638 CNPY1Q3B7I2 92 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 AARDQ4LEZ3 155 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 MPPE1Q53F39 396 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 DDI2Q5TDH0 399 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 MARC1Q5VT66 337 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 TMEM270Q6UE05 265 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 PAMR1Q6UXH9 720 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 ARL14Q8N4G2 192 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 GTSF1Q8WW33 167 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 CFAP36Q96G28 342 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 CAPNS2Q96L46 248 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.81□□□□□ -1.8
CALD1-219ENST00000480638 DDX28Q9NUL7 540 aaKnown RBP3.81□□□□□ -1.8
CALD1-219ENST00000480638 SEC14L4Q9UDX3 406 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 STX8Q9UNK0 236 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 DIMT1Q9UNQ2 313 aaKnown RBP3.81□□□□□ -1.8
CALD1-219ENST00000480638 ATG4BQ9Y4P1 393 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 KIF25-AS1Q9Y6Z4 181 aa3.81□□□□□ -1.8
CALD1-219ENST00000480638 LRRD1A4D1F6 860 aa3.8□□□□□ -1.8
CALD1-219ENST00000480638 FCER2P06734 321 aa3.8□□□□□ -1.8
CALD1-219ENST00000480638 MBL2P11226 248 aaPredicted RBP3.8□□□□□ -1.8
CALD1-219ENST00000480638 CTNNA1P35221 906 aaKnown RBP3.8□□□□□ -1.8
CALD1-219ENST00000480638 SMSP52788 366 aa3.8□□□□□ -1.8
CALD1-219ENST00000480638 SLC12A3P55017 1021 aa3.8□□□□□ -1.8
CALD1-219ENST00000480638 GEMP55040 296 aa3.8□□□□□ -1.8
CALD1-219ENST00000480638 NME5P56597 212 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms