RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 CCDC126Q96EE4 140 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 L3HYPDHQ96EM0 354 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 DEPPQ9NTK1 212 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 VPS29Q9UBQ0 182 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 TINAGQ9UJW2 476 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 ERVK-19Q9WJR5 959 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 UNC79Q9P2D8 2635 aa13.9□□□□□ -0.18
TDP2-205ENST00000480495 ACOT7O00154 380 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 MANBAO00462 879 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 PRRG2O14669 202 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 HS6ST1O60243 411 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 GLRA3O75311 464 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 PTGER1P34995 402 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 DCTP40126 519 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 RFC3P40938 356 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 PKNOX1P55347 436 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 SLC37A1P57057 533 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 NAA20P61599 178 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 PLGLB1Q02325 96 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 GALNT1Q10472 559 aaPredicted RBP13.89□□□□□ -0.19
TDP2-205ENST00000480495 TBL3Q12788 808 aaKnown RBP13.89□□□□□ -0.19
TDP2-205ENST00000480495 CSTF3Q12996 717 aaKnown RBP13.89□□□□□ -0.19
TDP2-205ENST00000480495 LCP2Q13094 533 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 ZNF750Q32MQ0 723 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 CMPK2Q5EBM0 449 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 GK5Q6ZS86 529 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 TDRPQ86YL5 185 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 CHERPQ8IWX8 916 aaKnown RBP13.89□□□□□ -0.19
TDP2-205ENST00000480495 EID3Q8N140 333 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 CDYL2Q8N8U2 506 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 UBLCP1Q8WVY7 318 aaPredicted RBP13.89□□□□□ -0.19
TDP2-205ENST00000480495 FAM173AQ9BQD7 235 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 WWTR1Q9GZV5 400 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 CXorf21Q9HAI6 301 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 SACM1LQ9NTJ5 587 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 PCDHA9Q9Y5H5 950 aa13.89□□□□□ -0.19
TDP2-205ENST00000480495 KLF2Q9Y5W3 355 aaPredicted RBP13.89□□□□□ -0.19
TDP2-205ENST00000480495 A0A1W2PPM1 405 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 C1orf226A1L170 272 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 CCDC151A5D8V7 595 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 ZNF354AO60765 605 aaPredicted RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 ULK1O75385 1050 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 NADKO95544 446 aaPredicted RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 P04436 131 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 PORP16435 677 aaPredicted RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 AGAP20933 346 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 HMOX2P30519 316 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 PTGS2P35354 604 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 XKP51811 444 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 SMSP52788 366 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 TRA2BP62995 288 aaKnown RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 HSF1Q00613 529 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 ZNF791Q3KP31 576 aaPredicted RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 C6orf163Q5TEZ5 329 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 ZNF787Q6DD87 383 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 XKRXQ6PP77 449 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 MRGPRGQ86SM5 289 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 SLC22A16Q86VW1 577 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 GALNT12Q8IXK2 581 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 METTL6Q8TCB7 284 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 CHTF18Q8WVB6 975 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 UCN3Q969E3 161 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 SPACA9Q96E40 222 aaPredicted RBP13.88□□□□□ -0.19
TDP2-205ENST00000480495 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 PSME2Q9UL46 239 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 MEMO1Q9Y316 297 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
TDP2-205ENST00000480495 PINLYPA6NC86 204 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 GOLGA6L10A6NI86 522 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 CDC40O60508 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
TDP2-205ENST00000480495 CLPSP04118 112 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 SHBGP04278 402 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 MYL2P10916 166 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 CPMP14384 443 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 KRT15P19012 456 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 SERPINB3P29508 390 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
TDP2-205ENST00000480495 CCT5P48643 541 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 PPIAP62937 165 aaKnown RBP13.87□□□□□ -0.19
TDP2-205ENST00000480495 FUT7Q11130 342 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 EBPQ15125 230 aaKnown RBP13.87□□□□□ -0.19
TDP2-205ENST00000480495 CCDC153Q494R4 210 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 SLC22A10Q63ZE4 541 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 SLC48A1Q6P1K1 146 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 ARHGAP11AQ6P4F7 1023 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 LYPD8Q6UX82 237 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 ZYG11AQ6WRX3 759 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 FAM47EQ6ZV65 393 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 SH2D5Q6ZV89 423 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 FGD2Q7Z6J4 655 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 DOLPP1Q86YN1 238 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 TAGAPQ8N103 731 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 C1orf52Q8N6N3 182 aaKnown RBP13.87□□□□□ -0.19
TDP2-205ENST00000480495 OR7G1Q8NGA0 311 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 FAM57AQ8TBR7 257 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 DOK4Q8TEW6 326 aa13.87□□□□□ -0.19
TDP2-205ENST00000480495 PAQR8Q8TEZ7 354 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms